Endy:Notebook/DNA Methyl Bit

Review

Scientific Literature

• Please use the format: Title, First Author, Journal, Year
• DNA demethylation: a lesson from the garden, Ikeda Y, Chromosoma, 2009
  • [1]
• DNA demethylation by DNA repair, Gehring M,Trends in genetics, 2009
  • [2]
• The colorful history of active DNA demethylation, Ooi SK, Cell, 2008
  • [3]
• Local DNA demethylation in vertebrates: how could it be performed and targeted?, Kress C, FEBS letters, 2001
  • [4]
• http://www.plosone.org/article/info:doi/10.1371/journal.pone.0000273
• http://www.jbc.org/cgi/content/abstract/279/50/52075
• http://www.ncbi.nlm.nih.gov/pubmed/8200522
• http://www.ncbi.nlm.nih.gov/pubmed/15802246
• http://www.ncbi.nlm.nih.gov/pubmed/12682301?dopt=Abstract
• http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=166483
• http://www.neb.com/nebecomm/tech_reference/restriction_enzymes/dam_dcm_methylases_of_ecoli.asp
• http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=eurekah∂=A78565
• http://nar.oxfordjournals.org/cgi/content/abstract/17/23/9571
• http://iai.asm.org/cgi/content/full/69/12/7197

Industry Resources

• New England Biolabs
  • Table of Restriction Enzyme Sensitivities to Dam, Dcm, and CpG Methylation

Exploratory Discussions

• Initial Discussion
• Do Demethylases Exist?

Requirements

Design

Implementation

Maintenance