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		<title>Escherichia coli/Nomenclature &amp; Abbreviations - Revision history</title>
		<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;action=history</link>
		<description>Revision history for this page on the wiki</description>
		<language>en</language>
		<generator>MediaWiki 1.13.2</generator>
		<lastBuildDate>Wed, 19 Jun 2013 03:33:59 GMT</lastBuildDate>
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			<title>Karmella Haynes at 17:35, 21 October 2012</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=638041&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
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			&lt;col class='diff-content' /&gt;
			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 17:35, 21 October 2012&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 37:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 37:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacZ&amp;amp;Delta;M15''' = partial deletion of the lacZ gene that allows &amp;amp;alpha; complementation of the &amp;amp;beta;-galactosidase gene; required for blue/white selection on XGal plates.&amp;nbsp; Deletes the amino portion of lacZ (aa 11-41).&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacZ&amp;amp;Delta;M15''' = partial deletion of the lacZ gene that allows &amp;amp;alpha; complementation of the &amp;amp;beta;-galactosidase gene; required for blue/white selection on XGal plates.&amp;nbsp; Deletes the amino portion of lacZ (aa 11-41).&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;* '''LAM-''' or '''λ-''' = lambda lysogen deletion; approximate map location: 17.40; information from [http://cgsc.biology.yale.edu/Mutation.php?ID=4499 CGSC] *'''[[User:Karmella Haynes|---Karmella]] 13:02, 21 October 2012 (EDT)''':&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;* '''LAM-''' or '''λ-''' = lambda lysogen deletion; approximate map location: 17.40; information from [http://cgsc.biology.yale.edu/Mutation.php?ID=4499 CGSC] *'''[[User:Karmella Haynes|---Karmella]] 13:02, 21 October 2012 (EDT)''':&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;nbsp;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;* '''LamR''' = mutation in malT1 conferring lambda resistance; synonym malT1(LamR) [http://cgsc.biology.yale.edu/Mutation.php?ID=4749] *'''[[User:Karmella Haynes|---Karmella]] 13:35, 21 October 2012 (EDT)''':&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:leuB|leuB]]''' = requires leucine&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:leuB|leuB]]''' = requires leucine&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&amp;amp;Delta;[[Ecoliwiki:lon|lon]]''' =&amp;nbsp; deletion of the lon protease&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&amp;amp;Delta;[[Ecoliwiki:lon|lon]]''' =&amp;nbsp; deletion of the lon protease&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:33:59 --&gt;
&lt;/table&gt;</description>
			<pubDate>Sun, 21 Oct 2012 17:35:44 GMT</pubDate>			<dc:creator>Karmella Haynes</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Karmella Haynes at 17:32, 21 October 2012</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=638039&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 17:32, 21 October 2012&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 63:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 63:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rnc|rnc]]''' = encodes RnaseIII (rnc-14 is a common null mutant)&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rnc|rnc]]''' = encodes RnaseIII (rnc-14 is a common null mutant)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rne|rne]]''' = encodes RnaseE (rne-3071 is a common temperature sensitive mutant)&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rne|rne]]''' = encodes RnaseE (rne-3071 is a common temperature sensitive mutant)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rpsL|rpsL]]''' =&amp;nbsp; mutation in ribosomal protein S12 conveying streptomycin resistance; also called strA&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rpsL|rpsL]]''' =&amp;nbsp; mutation in ribosomal protein S12 conveying streptomycin resistance; also called strA&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;, rpsL135(strR), strA135 [http://cgsc.biology.yale.edu/Mutation.php?ID=5280] *'''[[User:Karmella Haynes|---Karmella]] 13:27, 21 October 2012 (EDT)''':&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''sbcBC''' = ExoI activity abolished; usually present in recBC strains; recombination proficient, stable inverted repeats&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''sbcBC''' = ExoI activity abolished; usually present in recBC strains; recombination proficient, stable inverted repeats&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:srl|sr1]]''' = cannot metabolize sorbitol&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:srl|sr1]]''' = cannot metabolize sorbitol&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 80:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 80:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''xyl-5''' = blocked xylose metabolism&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''xyl-5''' = blocked xylose metabolism&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''Sm&amp;lt;sup&amp;gt;R&amp;lt;/sup&amp;gt;''' = Streptomycin resistance&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;; mutation of gene rpsL; synonyms '''rpsL135(strR)''', '''strA135''' [http://cgsc.biology.yale.edu/Mutation.php?ID=5280] *'''[[User:Karmella Haynes|---Karmella]] 13:27, 21 October 2012 (EDT)''':&lt;/del&gt;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''Sm&amp;lt;sup&amp;gt;R&amp;lt;/sup&amp;gt;''' = Streptomycin resistance&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;[[Category:Escherichia coli]]&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;[[Category:Escherichia coli]]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:33:59 --&gt;
&lt;/table&gt;</description>
			<pubDate>Sun, 21 Oct 2012 17:32:28 GMT</pubDate>			<dc:creator>Karmella Haynes</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Karmella Haynes at 17:27, 21 October 2012</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=638038&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
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			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 17:27, 21 October 2012&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 80:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 80:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''xyl-5''' = blocked xylose metabolism&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''xyl-5''' = blocked xylose metabolism&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''Sm&amp;lt;sup&amp;gt;R&amp;lt;/sup&amp;gt;''' = Streptomycin resistance&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''Sm&amp;lt;sup&amp;gt;R&amp;lt;/sup&amp;gt;''' = Streptomycin resistance&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;; mutation of gene rpsL; synonyms '''rpsL135(strR)''', '''strA135''' [http://cgsc.biology.yale.edu/Mutation.php?ID=5280] *'''[[User:Karmella Haynes|---Karmella]] 13:27, 21 October 2012 (EDT)''':&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;[[Category:Escherichia coli]]&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;[[Category:Escherichia coli]]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:33:59 --&gt;
&lt;/table&gt;</description>
			<pubDate>Sun, 21 Oct 2012 17:27:31 GMT</pubDate>			<dc:creator>Karmella Haynes</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Karmella Haynes at 17:02, 21 October 2012</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=638022&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 17:02, 21 October 2012&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 36:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 36:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacY''' = deficient in lactose transport; deletion of lactose permease (M protein)&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacY''' = deficient in lactose transport; deletion of lactose permease (M protein)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacZ&amp;amp;Delta;M15''' = partial deletion of the lacZ gene that allows &amp;amp;alpha; complementation of the &amp;amp;beta;-galactosidase gene; required for blue/white selection on XGal plates.&amp;nbsp; Deletes the amino portion of lacZ (aa 11-41).&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacZ&amp;amp;Delta;M15''' = partial deletion of the lacZ gene that allows &amp;amp;alpha; complementation of the &amp;amp;beta;-galactosidase gene; required for blue/white selection on XGal plates.&amp;nbsp; Deletes the amino portion of lacZ (aa 11-41).&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;nbsp;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;* '''LAM-''' or '''λ-''' = lambda lysogen deletion; approximate map location: 17.40; information from [http://cgsc.biology.yale.edu/Mutation.php?ID=4499 CGSC] *'''[[User:Karmella Haynes|---Karmella]] 13:02, 21 October 2012 (EDT)''':&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:leuB|leuB]]''' = requires leucine&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:leuB|leuB]]''' = requires leucine&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&amp;amp;Delta;[[Ecoliwiki:lon|lon]]''' =&amp;nbsp; deletion of the lon protease&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&amp;amp;Delta;[[Ecoliwiki:lon|lon]]''' =&amp;nbsp; deletion of the lon protease&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:33:59 --&gt;
&lt;/table&gt;</description>
			<pubDate>Sun, 21 Oct 2012 17:02:59 GMT</pubDate>			<dc:creator>Karmella Haynes</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Janet B. Matsen at 22:36, 17 October 2012</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=636289&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 22:36, 17 October 2012&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 17:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 17:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dam|dam]]''' = adenine methylation at GATC sequences exist; high recombination efficiency; DNA repair turned on&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dam|dam]]''' = adenine methylation at GATC sequences exist; high recombination efficiency; DNA repair turned on&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dcm|dcm]]''' = cytosine methylation at second C of CCWGG sites exist. dam &amp;amp; dcm are the default properties and always elided, while dam&amp;lt;sup&amp;gt;-&amp;lt;/sup&amp;gt; or dcm&amp;lt;sup&amp;gt;-&amp;lt;/sup&amp;gt; should be declare explicitly &amp;nbsp;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dcm|dcm]]''' = cytosine methylation at second C of CCWGG sites exist. dam &amp;amp; dcm are the default properties and always elided, while dam&amp;lt;sup&amp;gt;-&amp;lt;/sup&amp;gt; or dcm&amp;lt;sup&amp;gt;-&amp;lt;/sup&amp;gt; should be declare explicitly &amp;nbsp;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;nbsp;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*'''[http://www.invitrogen.com/site/us/en/home/Products-and-Services/Applications/Cloning/Transformation/expression-competent-cells.html DE3]''' = Lysogen that encodes T7 RNA polymerase. Used to induce expression in T7-driven expression systems&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:deoR|deoR]]''' = regulatory gene that allows constitutive expression of deoxyribose synthesis genes; permits uptake of large plasmids.&amp;nbsp; See Hanahan D, [http://patft.uspto.gov/netacgi/nph-Parser?u=/netahtml/srchnum.htm&amp;amp;Sect1=PTO1&amp;amp;Sect2=HITOFF&amp;amp;p=1&amp;amp;r=1&amp;amp;l=50&amp;amp;f=G&amp;amp;d=PALL&amp;amp;s1=4851348.WKU.&amp;amp;OS=PN/4851348&amp;amp;RS=PN/4851348 US Patent 4,851,348].&amp;nbsp; ***This has been called into question, as the DH10B genome sequence revealed that it is deoR&amp;lt;sup&amp;gt;+&amp;lt;/sup&amp;gt;.&amp;nbsp; See Durfee08, PMID 18245285.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:deoR|deoR]]''' = regulatory gene that allows constitutive expression of deoxyribose synthesis genes; permits uptake of large plasmids.&amp;nbsp; See Hanahan D, [http://patft.uspto.gov/netacgi/nph-Parser?u=/netahtml/srchnum.htm&amp;amp;Sect1=PTO1&amp;amp;Sect2=HITOFF&amp;amp;p=1&amp;amp;r=1&amp;amp;l=50&amp;amp;f=G&amp;amp;d=PALL&amp;amp;s1=4851348.WKU.&amp;amp;OS=PN/4851348&amp;amp;RS=PN/4851348 US Patent 4,851,348].&amp;nbsp; ***This has been called into question, as the DH10B genome sequence revealed that it is deoR&amp;lt;sup&amp;gt;+&amp;lt;/sup&amp;gt;.&amp;nbsp; See Durfee08, PMID 18245285.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dnaJ|dnaJ]]''' = one of the chaparonins inactivated; stabilizes some mutant proteins&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dnaJ|dnaJ]]''' = one of the chaparonins inactivated; stabilizes some mutant proteins&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:33:59 --&gt;
&lt;/table&gt;</description>
			<pubDate>Wed, 17 Oct 2012 22:36:27 GMT</pubDate>			<dc:creator>Janet B. Matsen</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Per Malkus at 14:43, 16 June 2009</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=315735&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
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			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 14:43, 16 June 2009&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 30:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 30:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''gyrA462''' = mutation in DNA gyrase; conveys resistance to ccdB colicin gene product&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''gyrA462''' = mutation in DNA gyrase; conveys resistance to ccdB colicin gene product&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''hflA150''' = protease mutation stabilizing phage cII protein;&amp;nbsp; high frequency of lysogenization by &amp;amp;lambda;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''hflA150''' = protease mutation stabilizing phage cII protein;&amp;nbsp; high frequency of lysogenization by &amp;amp;lambda;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&amp;amp;Delta;(lac)X74''' = Deletion of the entire ''lac'' operon as well as some flanking DNA.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&amp;amp;Delta;(lac)X74''' = Deletion of the entire ''lac'' operon as well as some flanking DNA &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;(complete deletion is &amp;amp;Delta;cod-mhpF; see Mol&lt;/ins&gt;.&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;Micro., 6:1335, and J.Bact., 179:2573)&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacI&amp;lt;sup&amp;gt;q&amp;lt;/sup&amp;gt;''' or '''lacI&amp;lt;sup&amp;gt;Q&amp;lt;/sup&amp;gt;''' = overproduction of the lac repressor protein; -35 site in promoter upstream of ''lacI'' is mutated from GCGCAA to GTGCAA&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacI&amp;lt;sup&amp;gt;q&amp;lt;/sup&amp;gt;''' or '''lacI&amp;lt;sup&amp;gt;Q&amp;lt;/sup&amp;gt;''' = overproduction of the lac repressor protein; -35 site in promoter upstream of ''lacI'' is mutated from GCGCAA to GTGCAA&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacI&amp;lt;sup&amp;gt;Q1&amp;lt;/sup&amp;gt;'''&amp;nbsp; = overproduction of the lac repressor protein; contains a 15 bp deletion to create optimal -35 site in promoter upstream of ''lacI''&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''lacI&amp;lt;sup&amp;gt;Q1&amp;lt;/sup&amp;gt;'''&amp;nbsp; = overproduction of the lac repressor protein; contains a 15 bp deletion to create optimal -35 site in promoter upstream of ''lacI''&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:33:59 --&gt;
&lt;/table&gt;</description>
			<pubDate>Tue, 16 Jun 2009 14:43:25 GMT</pubDate>			<dc:creator>Per Malkus</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Haran Sivakumaran: Abbreviations list: &quot;tryT&quot; -&gt; &quot;tyrT&quot;.</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=305775&amp;oldid=prev</link>
			<description>&lt;p&gt;Abbreviations list: &amp;quot;tryT&amp;quot; -&amp;gt; &amp;quot;tyrT&amp;quot;.&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
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			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 02:37, 4 May 2009&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 74:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 74:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:trxB|trxB]]''' = mutation in thioredoxin reductase; enhances disulphide bond formation in the cytoplasm&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:trxB|trxB]]''' = mutation in thioredoxin reductase; enhances disulphide bond formation in the cytoplasm&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:tsx|tsx]]''' = outer membrane protein mutation conveying resistance to phage T6 and colicin K&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:tsx|tsx]]''' = outer membrane protein mutation conveying resistance to phage T6 and colicin K&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:tyrT|&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;tryT&lt;/del&gt;]]''' = suppression of amber (UAG) stop codons by insertion of tyrosine; needed for some phage infection such as &amp;amp;lambda;gt11.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:tyrT|&lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;tyrT&lt;/ins&gt;]]''' = suppression of amber (UAG) stop codons by insertion of tyrosine; needed for some phage infection such as &amp;amp;lambda;gt11.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''ung1''' = allows uracil to exist in plasmid DNA&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''ung1''' = allows uracil to exist in plasmid DNA&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''xyl-5''' = blocked xylose metabolism&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''xyl-5''' = blocked xylose metabolism&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:34:00 --&gt;
&lt;/table&gt;</description>
			<pubDate>Mon, 04 May 2009 02:37:57 GMT</pubDate>			<dc:creator>Haran Sivakumaran</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Ma Rui at 17:00, 13 March 2009</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=293650&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
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			&lt;col class='diff-content' /&gt;
			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 17:00, 13 March 2009&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 15:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 15:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dapD|dapD]]''' = mutation in succinyl diaminopimelate aminotransferase leads to succinate or (lysine + methionine) requirement&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dapD|dapD]]''' = mutation in succinyl diaminopimelate aminotransferase leads to succinate or (lysine + methionine) requirement&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&amp;amp;Delta;( )''' = chromosomal deletion of genes between the listed genes (may include unlisted genes!)&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&amp;amp;Delta;( )''' = chromosomal deletion of genes between the listed genes (may include unlisted genes!)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dam|dam]]''' = adenine methylation at GATC sequences &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;abolished&lt;/del&gt;; high recombination efficiency; DNA repair turned on&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dam|dam]]''' = adenine methylation at GATC sequences &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;exist&lt;/ins&gt;; high recombination efficiency; DNA repair turned on&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dcm|dcm]]''' = cytosine methylation at second C of CCWGG sites &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;abolished&lt;/del&gt;&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dcm|dcm]]''' = cytosine methylation at second C of CCWGG sites &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;exist. dam &amp;amp; dcm are the default properties and always elided, while dam&amp;lt;sup&amp;gt;-&amp;lt;/sup&amp;gt; or dcm&amp;lt;sup&amp;gt;-&amp;lt;/sup&amp;gt; should be declare explicitly &lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:deoR|deoR]]''' = regulatory gene that allows constitutive expression of deoxyribose synthesis genes; permits uptake of large plasmids.&amp;nbsp; See Hanahan D, [http://patft.uspto.gov/netacgi/nph-Parser?u=/netahtml/srchnum.htm&amp;amp;Sect1=PTO1&amp;amp;Sect2=HITOFF&amp;amp;p=1&amp;amp;r=1&amp;amp;l=50&amp;amp;f=G&amp;amp;d=PALL&amp;amp;s1=4851348.WKU.&amp;amp;OS=PN/4851348&amp;amp;RS=PN/4851348 US Patent 4,851,348].&amp;nbsp; ***This has been called into question, as the DH10B genome sequence revealed that it is deoR&amp;lt;sup&amp;gt;+&amp;lt;/sup&amp;gt;.&amp;nbsp; See Durfee08, PMID 18245285.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:deoR|deoR]]''' = regulatory gene that allows constitutive expression of deoxyribose synthesis genes; permits uptake of large plasmids.&amp;nbsp; See Hanahan D, [http://patft.uspto.gov/netacgi/nph-Parser?u=/netahtml/srchnum.htm&amp;amp;Sect1=PTO1&amp;amp;Sect2=HITOFF&amp;amp;p=1&amp;amp;r=1&amp;amp;l=50&amp;amp;f=G&amp;amp;d=PALL&amp;amp;s1=4851348.WKU.&amp;amp;OS=PN/4851348&amp;amp;RS=PN/4851348 US Patent 4,851,348].&amp;nbsp; ***This has been called into question, as the DH10B genome sequence revealed that it is deoR&amp;lt;sup&amp;gt;+&amp;lt;/sup&amp;gt;.&amp;nbsp; See Durfee08, PMID 18245285.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dnaJ|dnaJ]]''' = one of the chaparonins inactivated; stabilizes some mutant proteins&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:dnaJ|dnaJ]]''' = one of the chaparonins inactivated; stabilizes some mutant proteins&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:34:00 --&gt;
&lt;/table&gt;</description>
			<pubDate>Fri, 13 Mar 2009 17:00:41 GMT</pubDate>			<dc:creator>Ma Rui</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Gwen at 06:03, 8 April 2008</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=195055&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

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				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 06:03, 8 April 2008&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 46:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 46:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''(Mu)''' = Mu prophage present.&amp;nbsp; Mu&amp;amp;delta; means the phage is defective.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''(Mu)''' = Mu prophage present.&amp;nbsp; Mu&amp;amp;delta; means the phage is defective.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:mutS|mutS]]''' - mutation inhibits DNA repair of mismatches in unmethylated newly synthesized strands&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:mutS|mutS]]''' - mutation inhibits DNA repair of mismatches in unmethylated newly synthesized strands&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;[[&lt;/del&gt;[[Ecoliwiki:nupG|nupG]]''' = same as [[Ecoliwiki:deoR|deoR]]&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:nupG|nupG]]''' = same as [[Ecoliwiki:deoR|deoR]]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:ompT|ompT]]''' = mutation in outer membrane protein protease VII, reducing proteolysis of expressed proteins&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:ompT|ompT]]''' = mutation in outer membrane protein protease VII, reducing proteolysis of expressed proteins&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''(P1)''' = Cell carries a P1 prophage.&amp;nbsp; Cells express the P1 restriction system.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''(P1)''' = Cell carries a P1 prophage.&amp;nbsp; Cells express the P1 restriction system.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:34:00 --&gt;
&lt;/table&gt;</description>
			<pubDate>Tue, 08 Apr 2008 06:03:41 GMT</pubDate>			<dc:creator>Gwen</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
		<item>
			<title>Gwen at 06:03, 8 April 2008</title>
			<link>http://www.openwetware.org/index.php?title=Escherichia_coli/Nomenclature_%26_Abbreviations&amp;diff=195054&amp;oldid=prev</link>
			<description>&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 06:03, 8 April 2008&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 60:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 60:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rha|rha]]''' = blocked rhamose metabolism&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rha|rha]]''' = blocked rhamose metabolism&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rnc|rnc]]''' = encodes RnaseIII (rnc-14 is a common null mutant)&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rnc|rnc]]''' = encodes RnaseIII (rnc-14 is a common null mutant)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''&lt;del class=&quot;diffchange diffchange-inline&quot;&gt;[[&lt;/del&gt;[[Ecoliwiki:rne|rne]]''' = encodes RnaseE (rne-3071 is a common temperature sensitive mutant)&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rne|rne]]''' = encodes RnaseE (rne-3071 is a common temperature sensitive mutant)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rpsL|rpsL]]''' =&amp;nbsp; mutation in ribosomal protein S12 conveying streptomycin resistance; also called strA&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''[[Ecoliwiki:rpsL|rpsL]]''' =&amp;nbsp; mutation in ribosomal protein S12 conveying streptomycin resistance; also called strA&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''sbcBC''' = ExoI activity abolished; usually present in recBC strains; recombination proficient, stable inverted repeats&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*'''sbcBC''' = ExoI activity abolished; usually present in recBC strains; recombination proficient, stable inverted repeats&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-06-19 03:34:00 --&gt;
&lt;/table&gt;</description>
			<pubDate>Tue, 08 Apr 2008 06:03:06 GMT</pubDate>			<dc:creator>Gwen</dc:creator>			<comments>http://www.openwetware.org/wiki/Talk:Escherichia_coli/Nomenclature_%26_Abbreviations</comments>		</item>
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