Franklin:Publications

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Selected Publications

1. Warburton S, Southwick K, Hardman RM, Secrest AM, Grow RK, Xin H, Woolley AT, Burton GF, and Thulin CD. Examining the proteins of functional retinal lipofuscin using proteomic analysis as a guide for understanding its origin. Mol Vis. 2005 Dec 15;11:1122-34.
2. Warburton S, Davis WE, Southwick K, Xin H, Woolley AT, Burton GF, and Thulin CD. Proteomic and phototoxic characterization of melanolipofuscin: correlation to disease and model for its origin. Mol Vis. 2007 Mar 1;13:318-29.
3. Warburton S, White MY, Van Eyk JE, Cotter RJ, Ping P, Dunn MJ, and Vondriska TM. Cardiovascular Initiative of the Human Proteome Organisation, 5th Workshop October 2007, Seoul, Korea. Proteomics. 2008 Mar;8(5):924-6. DOI:10.1002/pmic.200701083 |
4. Mitchell-Jordan SA, Holopainen T, Ren S, Wang S, Warburton S, Zhang MJ, Alitalo K, Wang Y, and Vondriska TM. Loss of Bmx nonreceptor tyrosine kinase prevents pressure overload-induced cardiac hypertrophy. Circ Res. 2008 Dec 5;103(12):1359-62. DOI:10.1161/CIRCRESAHA.108.186577 |
5. Lu G, Sun H, She P, Youn JY, Warburton S, Ping P, Vondriska TM, Cai H, Lynch CJ, and Wang Y. Protein phosphatase 2Cm is a critical regulator of branched-chain amino acid catabolism in mice and cultured cells. J Clin Invest. 2009 Jun;119(6):1678-87. DOI:10.1172/JCI38151 |
6. Singh H, Warburton S, Vondriska TM, and Khakh BS. Proteomics to identify proteins interacting with P2X2 ligand-gated cation channels. J Vis Exp. 2009 May 18(27). DOI:10.3791/1178 |
7. Lomenick B, Hao R, Jonai N, Chin RM, Aghajan M, Warburton S, Wang J, Wu RP, Gomez F, Loo JA, Wohlschlegel JA, Vondriska TM, Pelletier J, Herschman HR, Clardy J, Clarke CF, and Huang J. Target identification using drug affinity responsive target stability (DARTS). Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21984-9. DOI:10.1073/pnas.0910040106 |
8. Paulsson AK, Franklin S, Mitchell-Jordan SA, Ren S, Wang Y, and Vondriska TM. Post-translational regulation of calsarcin-1 during pressure overload-induced cardiac hypertrophy. J Mol Cell Cardiol. 2010 Jun;48(6):1206-14. DOI:10.1016/j.yjmcc.2010.02.009 |
9. Zhang MJ, Franklin S, Li Y, Wang S, Ru X, Mitchell-Jordan SA, Mano H, Stefani E, Ping P, and Vondriska TM. Stress signaling by Tec tyrosine kinase in the ischemic myocardium. Am J Physiol Heart Circ Physiol. 2010 Sep;299(3):H713-22. DOI:10.1152/ajpheart.00273.2010 |
10. Franklin S, Zhang MJ, Chen H, Paulsson AK, Mitchell-Jordan SA, Li Y, Ping P, and Vondriska TM. Specialized compartments of cardiac nuclei exhibit distinct proteomic anatomy. Mol Cell Proteomics. 2011 Jan;10(1):M110.000703. DOI:10.1074/mcp.M110.000703 |
11. Li Y, Franklin S, Zhang MJ, and Vondriska TM. Highly efficient purification of protein complexes from mammalian cells using a novel streptavidin-binding peptide and hexahistidine tandem tag system: application to Bruton's tyrosine kinase. Protein Sci. 2011 Jan;20(1):140-9. DOI:10.1002/pro.546 |
12. Javaherian AD, Yusifov T, Pantazis A, Franklin S, Gandhi CS, and Olcese R. Metal-driven operation of the human large-conductance voltage- and Ca2+-dependent potassium channel (BK) gating ring apparatus. J Biol Chem. 2011 Jun 10;286(23):20701-9. DOI:10.1074/jbc.M111.235234 |
13. Franklin S and Vondriska TM. Genomes, proteomes, and the central dogma. Circ Cardiovasc Genet. 2011 Oct;4(5):576. DOI:10.1161/CIRCGENETICS.110.957795 |
14. Franklin S, Chen H, Mitchell-Jordan S, Ren S, Wang Y, and Vondriska TM. Quantitative analysis of the chromatin proteome in disease reveals remodeling principles and identifies high mobility group protein B2 as a regulator of hypertrophic growth. Mol Cell Proteomics. 2012 Jun;11(6):M111.014258. DOI:10.1074/mcp.M111.014258 |