Galaxy at MIT: Difference between revisions
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Huiming Ding (talk | contribs) |
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! Jul 29 | ! Jul 29 | ||
| | | <B>Galaxy Setup</B>: Finish tweaking the installation and configuration of [[Galaxy_at_MIT|Galaxy at MIT]] instance. || (1) The solution for data transfer among user computer, data server and Galaxy server; (2) The solution for data maintenance on Galaxy server; (3) Local or network source code repository.|| Add your comments | ||
|- | |- | ||
! Aug 5 | ! Aug 5 | ||
| Test the Chip-Seq pipeline in Galaxy. || Ongoing || Add your comments | | <B>Chip-Seq Pipeline</B>: Test the Chip-Seq pipeline in Galaxy. || Ongoing || Add your comments | ||
|- | |- | ||
! Aug 12 | ! Aug 12 | ||
| Start some of the analyses on Boyer Lab data using Galaxy. || Ongoing || Add your comments | | <B>Chip-Seq Pipeline</B>: Start some of the analyses on Boyer Lab data using Galaxy. || Ongoing || Add your comments | ||
|- | |- | ||
! Aug 31 | ! Aug 31 | ||
| Make the Chip-Seq analytical pipeline in Galaxy available to | | <B>Chip-Seq Pipeline</B>: Make the Chip-Seq analytical pipeline in Galaxy available to users. || Ongoing || Add your comments | ||
|- | |- | ||
! Oct 31 | ! Oct 31 | ||
| Test some other pipelines such as RNA-Seq, CNV, whole genome etc in Galaxy. || Ongoing || Add your comments | | <B>Other Pipelines</B>: Test some other pipelines such as RNA-Seq, CNV, whole genome etc in Galaxy. || Ongoing || Add your comments | ||
|- | |- | ||
! Dec 31 | ! Dec 31 | ||
| Comparison of analytical pipelines in Galaxy and GenePattern. || Ongoing || Add your comments | | <B>Galaxy and GenePattern</B>: Comparison of features and analytical pipelines in Galaxy and GenePattern for better performance and usability. || Ongoing || Add your comments | ||
|} | |} | ||
=Outline= | =Outline= | ||
Revision as of 14:40, 27 July 2011
- Galaxy at MIT is a GALAXY INSTANCE installed at MIT.
Project Timelines
| Timelines | Plan | Status | Comments |
|---|---|---|---|
| Jul 29 | Galaxy Setup: Finish tweaking the installation and configuration of Galaxy at MIT instance. | (1) The solution for data transfer among user computer, data server and Galaxy server; (2) The solution for data maintenance on Galaxy server; (3) Local or network source code repository. | Add your comments |
| Aug 5 | Chip-Seq Pipeline: Test the Chip-Seq pipeline in Galaxy. | Ongoing | Add your comments |
| Aug 12 | Chip-Seq Pipeline: Start some of the analyses on Boyer Lab data using Galaxy. | Ongoing | Add your comments |
| Aug 31 | Chip-Seq Pipeline: Make the Chip-Seq analytical pipeline in Galaxy available to users. | Ongoing | Add your comments |
| Oct 31 | Other Pipelines: Test some other pipelines such as RNA-Seq, CNV, whole genome etc in Galaxy. | Ongoing | Add your comments |
| Dec 31 | Galaxy and GenePattern: Comparison of features and analytical pipelines in Galaxy and GenePattern for better performance and usability. | Ongoing | Add your comments |
