Griffitts:Bacterial Strains

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Revision as of 08:40, 5 October 2007 by Matthew B. Crook (talk | contribs) (Added strains)
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Griffitts Lab Bacterial Strains
Strain # Parental strain Plasmid Marker Notes
B001 DH5α pRK600 CmR pRK600 from MT616

Demonstrated to be a functional helper strain

B024 RM1021 None None ΔSmb21188 (acyl-T)
B025 RM1021 None None ΔSmb21189 and ΔSmb21190 (glycosyltransferases)
B026 RM1021 None None ΔSmb21191 (msbA2)
B042 RM1021 pTB93F None GFP+
B043 DH5α pXLGD4 TcR hemA::lacZ in pRK290
B044 DH5α pTB93F SpR ptrp::GFP S65T in pMB393
B060 M. loti None FmR MAFF303099; grows on TY-fosfomycin100
B061 XL1-Blue pMAL-C2G None
B062 XL1-Blue pGEX-5X-1 None
B063 DH5α pGEX-4T-1 None
B068 XL1-Blue pDG71 TcR, KmR plasmid provides ptrp:GFP (mut3) on pHC41, highly stable in planta
B078 MR1021 pRF771 None control strain
B079 MG1655 None None
B081 MC4100 None SmR F- araD139 Δ(argf-lac)U169* rpsL150 relA1 flb5301 fruA25 deoC1 ptsF25 e14-
B082 BW25139 None None pir+ recA+
B083 BW25141 None None pir+ recA- (use this one for cloning R6K plasmids)
B084 BW2141 pGP704 ApR pGP704 is pir-dependent
B087 S. fredii None None USDA257
B088 S. fredii None None NGR234
B089 A. tumefaciens None None LBA4404
B090 M. loti None None NZP2037
B091 R. tropici None None BR816
B093 B. japonicum None None USDA110
B094 MG1655 None SmR transduced with lysate from MC4100
B095 DH5α None None
B096 DH5α pRF771 None
B097 KS1000 None None from NEB
B098 TB1 None None from NEB
B099 DH5α pJQ200SK None May be HB101 instead of DH5α
B100 RM1021 None None
B103 RM1021 None None expR101 (expR+
B119 RM1021 None None ΔfeuP
B122 RM1021 None None ΔfeuQ
B125 RM1021 None None trsA mutant, trsA::Tn5-110
B146 RM1021 None None hisH- (interupted by Tn5-110)
B147 RM1021 None None aroF- (interupted by Tn5-110)
B148 RM1021 None None carA- (interupted by Tn5-110)
B149 RM1021 None None ndvA- (interupted by Tn5-110)
B150 RM1021 None None fixB- (interupted by Tn5-110)
B151 RM1021 None None dme- (interupted by Tn5-110)
B152 RM1021 None None fixI- (interupted by Tn5-110)
B154 RM1021 None None exoB- (interupted by Tn5-110)
B155 RM1021 None None nifK- (interupted by Tn5-110)
B156 RM1021 None None thrB- (interupted by Tn5-110)
B157 RM1021 None None tkt2- (interupted by Tn5-110)
B158 RM1021 None None ccmB- (interupted by Tn5-110)
B159 RM1021 None None exoF- (interupted by Tn5-110)
B160 RM1021 None None pckA- (interupted by Tn5-110)
B161 RM1021 None None carB- (interupted by Tn5-110)
B162 RM1021 None None relA- (interupted by Tn5-110)
B163 RM1021 None None bacA- (interupted by Tn5-110)
B164 RM1021 None None cycJ- (interupted by Tn5-110)
B165 RM1021 None None unknown gene essential for symbiosis interupted by Tn5-110
B166 RM1021 None None dctA- (interupted by Tn5-110)
B167 RM1021 None None phaA1- (interupted by Tn5-110)
B168 RM1021 None None ilvD2- (interupted by Tn5-110)
B169 RM1021 None None nodH- (interupted by Tn5-110)
B170 RM1021 None None leuD- (interupted by Tn5-110)
B171 RM1021 None None exoY- (interupted by Tn5-110)
B172 RM1021 None None fixG- (interupted by Tn5-110)
B173 RM1021 None None leuB- (interupted by Tn5-110)
B174 RM1021 None None dctB- (interupted by Tn5-110)
B175 RM1021 None None phoC- (interupted by Tn5-110)
B176 RM1021 None None phoE- (interupted by Tn5-110)
B177 RM1021 None None gltD- (interupted by Tn5-110)
B178 RM1021 None None ccmC- (interupted by Tn5-110)
B179 RM1021 None None purF- (interupted by Tn5-110)
B180 RM1021 None None unknown gene essential for symbiosis interupted by Tn5-110
B181 RM1021 None None hisF- (interupted by Tn5-110)
B181 RM1021 None None hisF- (interupted by Tn5-110)
B181 RM1021 None None hisF- (interupted by Tn5-110)
B182 RM1021 None None cycH- (interupted by Tn5-110)
B183 RM1021 None None leuC- (interupted by Tn5-110)
B184 RM1021 None None leuA- (interupted by Tn5-110)
B185 RM1021 None None nifB- (interupted by Tn5-110)
B186 RM1021 None None fixX- (interupted by Tn5-110)
B187 RM1021 None None feuQ- (interupted by Tn5-110)
B188 RM1021 None None feuP- (interupted by Tn5-110)
B189 RM1021 None None fixL- (interupted by Tn5-110)
B190 RM1021 None None trpE- (interupted by Tn5-110)
B191 RM1021 None None purK- (interupted by Tn5-110)
B192 RM1021 None None purL- (interupted by Tn5-110)
B193 RM1021 None None purC- (interupted by Tn5-110)