Harmer Lab:Publications

Room 2123 Department of Plant Biology 1002 Life Sciences, One Shields Ave. University of California Davis Davis, CA 95616 Contact: slharmer at ucdavis.edu

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Publications Harmer, S.L. (2009) The circadian system in higher plants.Annual Review of Plant Biology, 60: 357-377 (http://arjournals.annualreviews.org/eprint/GvGayFxfPcKRbxThDrEC/full/10.1146/annurev.arplant.043008.092054) Covington MF, Maloof JN, Straume M, Kay SA, and Harmer SL. Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development. Genome Biol. 2008;9(8):R130. DOI:10.1186/gb-2008-9-8-r130 | Martin-Tryon EL and Harmer SL. XAP5 CIRCADIAN TIMEKEEPER coordinates light signals for proper timing of photomorphogenesis and the circadian clock in Arabidopsis. Plant Cell. 2008 May;20(5):1244-59. DOI:10.1105/tpc.107.056655 | Gong, W., He, K., Covington, M.F., Dinesh-Kumar, S.P., Snyder, M., Harmer, S.L., Zhu, X., and Deng, X.P. (2008). The development of protein microarrays and their applications in DNA-protein and protein-protein interaction analyses of Arabidopsis transcription factors. Molecular Plant, 1(1): 27 – 41. Covington MF and Harmer SL. The circadian clock regulates auxin signaling and responses in Arabidopsis. PLoS Biol. 2007 Aug;5(8):e222. DOI:10.1371/journal.pbio.0050222 | Martin-Tryon EL, Kreps JA, and Harmer SL. GIGANTEA acts in blue light signaling and has biochemically separable roles in circadian clock and flowering time regulation. Plant Physiol. 2007 Jan;143(1):473-86. DOI:10.1104/pp.106.088757 | Walley JW, Coughlan S, Hudson ME, Covington MF, Kaspi R, Banu G, Harmer SL, and Dehesh K. Mechanical stress induces biotic and abiotic stress responses via a novel cis-element. PLoS Genet. 2007 Oct;3(10):1800-12. DOI:10.1371/journal.pgen.0030172 | Nozue K, Covington MF, Duek PD, Lorrain S, Fankhauser C, Harmer SL, and Maloof JN. Rhythmic growth explained by coincidence between internal and external cues. Nature. 2007 Jul 19;448(7151):358-61. DOI:10.1038/nature05946 | Oliverio KA, Crepy M, Martin-Tryon EL, Milich R, Harmer SL, Putterill J, Yanovsky MJ, and Casal JJ. GIGANTEA regulates phytochrome A-mediated photomorphogenesis independently of its role in the circadian clock. Plant Physiol. 2007 May;144(1):495-502. DOI:10.1104/pp.107.097048 | Harmer SL and Kay SA. Positive and negative factors confer phase-specific circadian regulation of transcription in Arabidopsis. Plant Cell. 2005 Jul;17(7):1926-40. DOI:10.1105/tpc.105.033035 | Farré EM, Harmer SL, Harmon FG, Yanovsky MJ, and Kay SA. Overlapping and distinct roles of PRR7 and PRR9 in the Arabidopsis circadian clock. Curr Biol. 2005 Jan 11;15(1):47-54. DOI:10.1016/j.cub.2004.12.067 | Alabadí D, Yanovsky MJ, Más P, Harmer SL, and Kay SA. Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis. Curr Biol. 2002 Apr 30;12(9):757-61. DOI:10.1016/s0960-9822(02)00815-1 | Harmer SL, Hogenesch JB, Straume M, Chang HS, Han B, Zhu T, Wang X, Kreps JA, and Kay SA. Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. Science. 2000 Dec 15;290(5499):2110-3. DOI:10.1126/science.290.5499.2110 |