Harvard:Biophysics 101/2007/04/10: Difference between revisions

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***Disease lists from WHO - cross ref with pubmed
***Disease lists from WHO - cross ref with pubmed
**Frequency of deleterious allele
**Frequency of deleterious allele
***[http://www.genecards.org/index.shtml GeneCards]
**Clustering alleles for relevance to particular diseases
**Clustering alleles for relevance to particular diseases
**Treatment
**Treatment
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**Not just script also paste in sequence
**Not just script also paste in sequence
**Maybe useful source for getting sequence data
**Maybe useful source for getting sequence data
*Non OMIM based analysis of sequence analysis

Revision as of 08:12, 10 April 2007

What we have now:

  • Sequence
  • RS#
  • OMIM
  • Parsed OMIM output
    • Pubmed - reviews and related articles
    • News (sort good from bad)
    • Wikipedia

What we need:

  • Prioritize RS# - How to quantify the criteria below?
    • Disease relevance
      • Number of PMID's
      • Number of drugs for particular disease
      • Disease lists from WHO - cross ref with pubmed
    • Frequency of deleterious allele
    • Clustering alleles for relevance to particular diseases
    • Treatment
    • Known alleles
    • Penetrance
  • Web interface
    • Not just script also paste in sequence
    • Maybe useful source for getting sequence data
  • Non OMIM based analysis of sequence analysis
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