Harvard:Biophysics 242r/2011:Schedule: Difference between revisions
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| Monday, January 31 (Session 3)||William Shih||Origami and large structures | | Monday, January 31 (Session 3)||William Shih||Origami and large structures | ||
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| <div style="color:red">CANCELLED</div> Wednesday, February 2 | | <div style="color:red">CANCELLED</div> Wednesday, February 2|||| | ||
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| Monday, February 7 (Session | | Monday, February 7 (Session 4)<br><div style="color:green">Special location: NRB335</div>||Dave Zhang||DNA base-pairing biophysics and informational circuits | ||
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| Wednesday, February 9 (Session | | Wednesday, February 9 (Session 5)||William Shih||<div style="color:green">software demo: caDNAno for DNA-origami design</div> | ||
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| Monday, February 14 (Session | | Monday, February 14 (Session 6)||Peng Yin||Dynamic DNA nanomachines | ||
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| Wednesday, February 16 (Session | | Wednesday, February 16 (Session 7)||Adam Marblestone||<div style="color:green">software demo: NuPack for sequence analysis and design</div> | ||
|- | |- | ||
| Monday, February 21 (Session | | Monday, February 21 (Session 8)||Peng Yin||Current applications in DNA nanotechnology | ||
|- | |- | ||
| Wednesday, February 23 (Session | | Wednesday, February 23 (Session 9)||Vatsan Raman||Computational Protein Design | ||
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| Monday, February 28 (Session | | Monday, February 28 (Session 10)||Vatsan Raman||<div style="color:green">software demo: FoldIt and Rosetta Protein Design</div> | ||
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| Wednesday, March 2 (Session | | Wednesday, March 2 (Session 11)||students||Midterm Presentations I | ||
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| Monday, March 7|||| <div style="color:red">no class meeting (Biophysical Society Meeting)</div> | | Monday, March 7|||| <div style="color:red">no class meeting (Biophysical Society Meeting)</div> | ||
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| Wednesday, March 9 (Session | | Wednesday, March 9 (Session 12)||students||Midterm Presentations II | ||
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| Monday, March 15||||<div style="color:red">no class meeting (Spring Break)</div> | | Monday, March 15||||<div style="color:red">no class meeting (Spring Break)</div> | ||
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| Wednesday, March 17||||<div style="color:red">no class meeting (Spring Break)</div> | | Wednesday, March 17||||<div style="color:red">no class meeting (Spring Break)</div> | ||
|- | |- | ||
| Monday, March 21 (Session | | Monday, March 21 (Session 13)||Adam Marblestone||Methods for nanoscale-device characterization | ||
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| Wednesday, March 23 (Session | | Wednesday, March 23 (Session 14)||Tom Schaus||<div style="color:green">software demo: Nucleic-acid kinetic simulation</div> | ||
|- | |- | ||
| Monday, March 28 (Session | | Monday, March 28 (Session 15)||Joanna Aizenberg||Bioinspired actuation systems | ||
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| Wednesday, March 30 (Session | | Wednesday, March 30 (Session 16)||Milan Stojanovic||Creepy Spiders | ||
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| Monday, April 4 (Session | | Monday, April 4 (Session 17)||Feng Zhang||Engineering DNA-binding proteins: zinc fingers versus Tal | ||
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| Wednesday, April 6 (Session | | Wednesday, April 6 (Session 18)||Shawn Douglas||<div style="color:green">software demo: caDNAno v2 for DNA-origami design </div> | ||
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| Monday, April 11 ||Neel Joshi||Peptide and protein self-assembly with a focus on rational design of new assembly modes (Note: core staff away at FNANO Meeting) | | Monday, April 11 ||Neel Joshi||Peptide and protein self-assembly with a focus on rational design of new assembly modes (Note: core staff away at FNANO Meeting) | ||
|- | |- | ||
| Wednesday, April 13 (Session | | Wednesday, April 13 (Session 19)||George Church||Hybrid electronic-biochemical systems | ||
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| Monday, April 18 (Session | | Monday, April 18 (Session 20)||L. Mahadevan||Multistable macromolecular assemblies | ||
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| Wednesday, April 20 (Session | | Wednesday, April 20 (Session 21)||George Church||Minimal in vitro replicating systems | ||
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| Monday, April 25 (Session | | Monday, April 25 (Session 22)||William Shih||Directed molecular evolution | ||
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| Wednesday, April 27 (Session | | Wednesday, April 27 (Session 23)||Peng Yin||Future of biomolecular nanotechnology | ||
|- | |- | ||
| Monday, May 2 (Session | | Monday, May 2 (Session 24)||students||Final Presentations I | ||
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| Wednesday, May 4 (Session | | Wednesday, May 4 (Session 25)||students||Final Presentations II | ||
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|} | |} | ||
</div> | </div> |
Revision as of 12:08, 1 February 2011
Please note: Class is cancelled on Wednesday, February 2 due to the severe winter weather.
Course meetings are on Mondays and Wednesdays in CLSB521 from 100 pm to 230 pm, with immediately following optional project sessions from 230 pm to 330 pm; these optional sessions will commence on Wednesday, February 2.
Date | Presenter(s) | Topic |
Monday, January 24 (Session 1) | William Shih | Course Overview, midterm projects, biomolecular nano primitives |
Wednesday, January 26 (Session 2) | John Sadowski | software demo: nanoEngineer for biomolecular visualization
|
Monday, January 31 (Session 3) | William Shih | Origami and large structures |
CANCELLED Wednesday, February 2 |
||
Monday, February 7 (Session 4) Special location: NRB335 |
Dave Zhang | DNA base-pairing biophysics and informational circuits |
Wednesday, February 9 (Session 5) | William Shih | software demo: caDNAno for DNA-origami design
|
Monday, February 14 (Session 6) | Peng Yin | Dynamic DNA nanomachines |
Wednesday, February 16 (Session 7) | Adam Marblestone | software demo: NuPack for sequence analysis and design
|
Monday, February 21 (Session 8) | Peng Yin | Current applications in DNA nanotechnology |
Wednesday, February 23 (Session 9) | Vatsan Raman | Computational Protein Design |
Monday, February 28 (Session 10) | Vatsan Raman | software demo: FoldIt and Rosetta Protein Design
|
Wednesday, March 2 (Session 11) | students | Midterm Presentations I |
Monday, March 7 | no class meeting (Biophysical Society Meeting)
| |
Wednesday, March 9 (Session 12) | students | Midterm Presentations II |
Monday, March 15 | no class meeting (Spring Break)
| |
Wednesday, March 17 | no class meeting (Spring Break)
| |
Monday, March 21 (Session 13) | Adam Marblestone | Methods for nanoscale-device characterization |
Wednesday, March 23 (Session 14) | Tom Schaus | software demo: Nucleic-acid kinetic simulation
|
Monday, March 28 (Session 15) | Joanna Aizenberg | Bioinspired actuation systems |
Wednesday, March 30 (Session 16) | Milan Stojanovic | Creepy Spiders |
Monday, April 4 (Session 17) | Feng Zhang | Engineering DNA-binding proteins: zinc fingers versus Tal |
Wednesday, April 6 (Session 18) | Shawn Douglas | software demo: caDNAno v2 for DNA-origami design
|
Monday, April 11 | Neel Joshi | Peptide and protein self-assembly with a focus on rational design of new assembly modes (Note: core staff away at FNANO Meeting) |
Wednesday, April 13 (Session 19) | George Church | Hybrid electronic-biochemical systems |
Monday, April 18 (Session 20) | L. Mahadevan | Multistable macromolecular assemblies |
Wednesday, April 20 (Session 21) | George Church | Minimal in vitro replicating systems |
Monday, April 25 (Session 22) | William Shih | Directed molecular evolution |
Wednesday, April 27 (Session 23) | Peng Yin | Future of biomolecular nanotechnology |
Monday, May 2 (Session 24) | students | Final Presentations I |
Wednesday, May 4 (Session 25) | students | Final Presentations II |