Haynes Lab:Notebook/RNA-seq of PcTF Transfected U2OS & SK-N-SH cell lines/2015/01/23: Difference between revisions

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Photographs of the KAH126/U2OS samples induced on 1/19 (4 days post-induction):
Photographs of the KAH126/U2OS samples induced on 1/19 (4 days post-induction):


[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_1_phase_%26_mCherry_10x.jpg | 250px | Well 1]]
[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_1_phase_%26_mCherry_10x.jpg | 250px | Well 1]]  [[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_2_phase_%26_mCherry_10x.jpg | 250px | Well 2]]


[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_2_phase_%26_mCherry_10x.jpg | 250px | Well 2]]
[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_3_phase_%26_mCherry_10x.jpg | 250px | Well 3]]  [[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_4_phase_%26_mCherry_10x.jpg | 250px | Well 4]]


[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_3_phase_%26_mCherry_10x.jpg | 250px | Well 3]]
[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_5_negative_control_phase_%26_mCherry_10x.jpg | 250px | Well 5 (negative control)]] [[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_6_negative_control_phase_%26_mCherry_10x.jpg | 250px | Well 6 (negative control)]]
 
[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_4_phase_%26_mCherry_10x.jpg | 250px | Well 4]]
 
[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_5_negative_control_phase_%26_mCherry_10x.jpg | 250px | Well 5 (negative control)]]
 
[[Image:2015-01-23_KAH126-U2OS_day4postinduction_Well_6_negative_control_phase_%26_mCherry_10x.jpg | 250px | Well 6 (negative control)]]


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Revision as of 16:59, 23 January 2015

RNA-seq of PcTF Transfected U2OS & SK-N-SH cell lines <html><img src="/images/9/94/Report.png" border="0" /></html> Main project page
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Summary

The KAH126/U2OS cells in the 6-well plate that were induced to produce PcTF-RFP back on Monday are ready for the first round of harvesting. I'll be isolating the RNA from them and storing the RNA at -80°C before sending the samples out for analysis early next week.

Also need to passage the SKNSH culture from PS-β to PS-1 and the KAH126/U2OS culture from PS-4 to PS-5.



Goals

  • Passage SKNSH
  • Passage KAH126/U2OS, save some for Karmella's plates
  • Harvest RNA from KAH126/U2OS induced on Jan 19th



Protocol

TRIzol/RNEasy Spin Column Protocol

passaging mammalian cells




Notes

Observations, measurements, placeholder info etc. go here.



Results/Conclusions

Photographs of the KAH126/U2OS samples induced on 1/19 (4 days post-induction):

Well 1 Well 2

Well 3 Well 4

Well 5 (negative control) Well 6 (negative control)


Photographs of the KAH126/U2OS samples induced on 1/22 (1 day post-induction):

Well 1 (negative control)

Well 2 (negative control)

Well 3

Well 4

Well 5

Well 6


Photographs of the U2OS samples transfected on 1/22 (1 day post-transfection):

Well 1

Well 2

Well 3

Well 4

Well 5 (negative control)

Well 6 (negative control)