Haynes Lab:Notebook/RNA-seq of PcTF Transfected U2OS & SK-N-SH cell lines/2015/01/27: Difference between revisions
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|style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;">RNA-seq of PcTF Transfected U2OS & SK-N-SH cell lines</span> | |style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;">RNA-seq of PcTF Transfected U2OS & SK-N-SH cell lines</span> | ||
|style="background-color: #F2F2F2" align="center"| | |style="background-color: #F2F2F2" align="center"|[[File:Report.png|frameless|link={{#sub:{{FULLPAGENAME}}|0|-11}}]][[{{#sub:{{FULLPAGENAME}}|0|-11}}|Main project page]]<br />{{#if:{{#lnpreventry:{{FULLPAGENAME}}}}|[[File:Resultset_previous.png|frameless|link={{#lnpreventry:{{FULLPAGENAME}}}}]][[{{#lnpreventry:{{FULLPAGENAME}}}}{{!}}Previous entry]] }}{{#if:{{#lnnextentry:{{FULLPAGENAME}}}}|[[{{#lnnextentry:{{FULLPAGENAME}}}}{{!}}Next entry]][[File:Resultset_next.png|frameless|link={{#lnnextentry:{{FULLPAGENAME}}}}]]}} | ||
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==Goals== | ==Goals== | ||
* | * RNA extraction of U2OS & KAH126/U2OS samples | ||
<br><br> | <br><br> | ||
==Protocol== | ==Protocol== | ||
[http://openwetware.org/wiki/Haynes: | [http://openwetware.org/wiki/Haynes:TRIzol_RNeasy RNA mini-prep w/ TRIzol & RNeasy] | ||
<br><br> | <br><br> | ||
==Notes== | ==Notes== | ||
Observations, measurements, placeholder info etc. go here. | Observations, measurements, placeholder info etc. go here. | ||
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==Results/Conclusions== | ==Results/Conclusions== | ||
Six samples were collected and placed in the -80°C freezer: | |||
<u>U2OS</u> | |||
* Well 1 | |||
* Well 2 | |||
* Well 5 (negative control) | |||
<u>KAH126/U2OS</u> | |||
* Well 2 (negative control) | |||
* Well 5 | |||
* Well 6 | |||
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Also, unrelated to the above samples, but the RNA collected from the previous KAH126/U2OS induction was from wells 1, 2 and 5, rather than 1, 2 and 4. The sample labeled "Well 4" is still a negative control. | |||
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Latest revision as of 00:41, 27 September 2017
RNA-seq of PcTF Transfected U2OS & SK-N-SH cell lines | Main project page Previous entry Next entry |
SummaryThe U2OS and KAH126/U2OS cultures are on day 5 of their transfections/inductions, respectively, so it's time to harvest for RNA. The U2OS culture is probably done after this, as the remaining wells had very poor transfection efficiencies.
Goals
ProtocolRNA mini-prep w/ TRIzol & RNeasy
NotesObservations, measurements, placeholder info etc. go here.
Results/ConclusionsSix samples were collected and placed in the -80°C freezer: U2OS
Also, unrelated to the above samples, but the RNA collected from the previous KAH126/U2OS induction was from wells 1, 2 and 5, rather than 1, 2 and 4. The sample labeled "Well 4" is still a negative control.
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