Haynes Lab:Notebook/Synthetic Biology and Bioinformatics for Predictable Control of Therapeutic Gene2/2012/06/18: Difference between revisions
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* Note: In order for this analysis to work all Gene Name IDs need to be in the form of GO Accession. Go to [http://uswest.ensembl.org/biomart/martview/636d149aaa2e9bda66dcf2322dc354a1 BIOMART ENSEMBL] and follow these [http://www.biostars.org/post/show/16230/find-gene-symbolgene-name-according-to-orf-accession/ DIRECTIONS]. Make sure you check off "GO Term Accession" under the EXTERNAL category. | * Note: In order for this analysis to work all Gene Name IDs need to be in the form of GO Accession. Go to [http://uswest.ensembl.org/biomart/martview/636d149aaa2e9bda66dcf2322dc354a1 BIOMART ENSEMBL] and follow these [http://www.biostars.org/post/show/16230/find-gene-symbolgene-name-according-to-orf-accession/ DIRECTIONS]. Make sure you check off "GO Term Accession" under the EXTERNAL category. | ||
'''Biological Process''' | '''Biological Process''' <br> | ||
GO:0022610 biological adhesion <br> | GO:0022610 biological adhesion <br> | ||
GO:0065007 biological regulation | GO:0065007 biological regulation <br> | ||
GO:0009758 carbohydrate utilization | GO:0009758 carbohydrate utilization <br> | ||
GO:0015976 carbon utilization | GO:0015976 carbon utilization <br> | ||
GO:0001906 cell killing | GO:0001906 cell killing <br> | ||
GO:0008283 cell proliferation | GO:0008283 cell proliferation <br> | ||
GO:0071840 cellular component organization or biogenesis | GO:0071840 cellular component organization or biogenesis <br> | ||
GO:0009987 cellular process | GO:0009987 cellular process <br> | ||
GO:0016265 death | GO:0016265 death <br> | ||
GO:0032502 developmental process | GO:0032502 developmental process <br> | ||
GO:0051234 establishment of localization | GO:0051234 establishment of localization <br> | ||
GO:0040007 growth | GO:0040007 growth <br> | ||
GO:0002376 immune system process | GO:0002376 immune system process <br> | ||
GO:0051179 localization | GO:0051179 localization <br> | ||
GO:0040011 locomotion | GO:0040011 locomotion <br> | ||
GO:0008152 metabolic process | GO:0008152 metabolic process <br> | ||
GO:0051704 multi-organism process | GO:0051704 multi-organism process <br> | ||
GO:0032501 multicellular organismal process | GO:0032501 multicellular organismal process <br> | ||
GO:0048519 negative regulation of biological process | GO:0048519 negative regulation of biological process <br> | ||
GO:0019740 nitrogen utilization | GO:0019740 nitrogen utilization <br> | ||
GO:0036166 phenotypic switching | GO:0036166 phenotypic switching <br> | ||
GO:0006794 phosphorus utilization | GO:0006794 phosphorus utilization <br> | ||
GO:0043473 pigmentation | GO:0043473 pigmentation <br> | ||
GO:0048518 positive regulation of biological process | GO:0048518 positive regulation of biological process <br> | ||
GO:0050789 regulation of biological process | GO:0050789 regulation of biological process <br> | ||
GO:0000003 reproduction | GO:0000003 reproduction <br> | ||
GO:0022414 reproductive process | GO:0022414 reproductive process <br> | ||
GO:0050896 response to stimulus | GO:0050896 response to stimulus <br> | ||
GO:0048511 rhythmic process | GO:0048511 rhythmic process <br> | ||
GO:0023052 signaling | GO:0023052 signaling <br> | ||
GO:0006791 sulfur utilization | GO:0006791 sulfur utilization <br> | ||
GO:0016032 viral reproduction | GO:0016032 viral reproduction <br> | ||
'''Molecular Function''' | '''Molecular Function''' <br> | ||
GO:0016209 antioxidant activity | GO:0016209 antioxidant activity <br> | ||
GO:0005488 binding | GO:0005488 binding <br> | ||
GO:0003824 catalytic activity | GO:0003824 catalytic activity <br> | ||
GO:0016247 channel regulator activity | GO:0016247 channel regulator activity <br> | ||
GO:0042056 chemoattractant activity | GO:0042056 chemoattractant activity <br> | ||
GO:0045499 chemorepellent activity | GO:0045499 chemorepellent activity <br> | ||
GO:0009055 electron carrier activity | GO:0009055 electron carrier activity <br> | ||
GO:0030234 enzyme regulator activity | GO:0030234 enzyme regulator activity <br> | ||
GO:0016530 metallochaperone activity | GO:0016530 metallochaperone activity <br> | ||
GO:0060089 molecular transducer activity | GO:0060089 molecular transducer activity <br> | ||
GO:0016015 morphogen activity | GO:0016015 morphogen activity <br> | ||
GO:0001071 nucleic acid binding transcription factor activity | GO:0001071 nucleic acid binding transcription factor activity <br> | ||
GO:0045735 nutrient reservoir activity | GO:0045735 nutrient reservoir activity <br> | ||
GO:0000988 protein binding transcription factor activity | GO:0000988 protein binding transcription factor activity <br> | ||
GO:0031386 protein tag | GO:0031386 protein tag <br> <br> | ||
GO:0004872 receptor activity | GO:0004872 receptor activity <br> | ||
GO:0030545 receptor regulator activity | GO:0030545 receptor regulator activity <br> | ||
GO:0005198 structural molecule activity | GO:0005198 structural molecule activity <br> | ||
GO:0045182 translation regulator activity | GO:0045182 translation regulator activity <br> | ||
GO:0005215 transporter activity | GO:0005215 transporter activity <br> | ||
'''Cellular Component''' | '''Cellular Component''' <br> | ||
GO:0016209 antioxidant activity | GO:0016209 antioxidant activity <br> | ||
GO:0005488 binding | GO:0005488 binding <br> | ||
GO:0003824 catalytic activity | GO:0003824 catalytic activity <br> | ||
GO:0016247 channel regulator activity | GO:0016247 channel regulator activity <br> | ||
GO:0042056 chemoattractant activity | GO:0042056 chemoattractant activity <br> | ||
GO:0045499 chemorepellent activity | GO:0045499 chemorepellent activity <br> | ||
GO:0009055 electron carrier activity | GO:0009055 electron carrier activity <br> | ||
GO:0030234 enzyme regulator activity | GO:0030234 enzyme regulator activity <br> | ||
GO:0016530 metallochaperone activity | GO:0016530 metallochaperone activity <br> | ||
GO:0060089 molecular transducer activity | GO:0060089 molecular transducer activity <br> | ||
GO:0016015 morphogen activity | GO:0016015 morphogen activity <br> | ||
GO:0001071 nucleic acid binding transcription factor activity | GO:0001071 nucleic acid binding transcription factor activity <br> | ||
GO:0045735 nutrient reservoir activity | GO:0045735 nutrient reservoir activity <br> | ||
GO:0000988 protein binding transcription factor activity | GO:0000988 protein binding transcription factor activity <br> | ||
GO:0031386 protein tag | GO:0031386 protein tag <br> | ||
GO:0004872 receptor activity | GO:0004872 receptor activity <br> | ||
GO:0030545 receptor regulator activity | GO:0030545 receptor regulator activity <br> | ||
GO:0005198 structural molecule activity | GO:0005198 structural molecule activity <br> | ||
GO:0045182 translation regulator activity | GO:0045182 translation regulator activity <br> | ||
GO:0005215 transporter activity | GO:0005215 transporter activity <br> | ||
Revision as of 14:17, 18 June 2012
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GO Term Categorizing
Biological Process Molecular Function Cellular Component
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