Haynes Lab:Notebook/Synthetic Biology and Bioinformatics for Predictable Control of Therapeutic Genes/2012/03/04: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
(Autocreate 2012/03/04 Entry for Haynes_Lab:Notebook/Synthetic_Biology_and_Bioinformatics_for_Predictable_Control_of_Therapeutic_Genes)
 
Line 6: Line 6:
| colspan="2"|
| colspan="2"|
<!-- ##### DO NOT edit above this line unless you know what you are doing. ##### -->
<!-- ##### DO NOT edit above this line unless you know what you are doing. ##### -->
==Entry title==
==Relationship Between Score and Signal Value==
* Insert content here...
* I've made a recent observation as I was making graphs on excel. As I was changing the score and signal values I discovered that the two actually do correlate with each other. For example, when the signal value is set to 4 or greater and the score is set to 160 or greater the only signal values that are passing through are mostly 8 or greater. Same thing happened for the signal value of 5. Interestingly enough, let's say the signal value is 4 and the score is 160 and the signal value is 5 and the score is 160. They return the same amount of hits at 7563. I think at this point I will be ignoring score for the data and only setting signal value cutoffs (I will choose a signal value of 5 for now). Also to be noted is that if the signal is at 5 that means changing the score cutoff will not affect the amount of hits returned until the score is 140 or greater. Same for a signal value of 4, the amount of hits returned are the same until the score is 130 or greater.





Revision as of 17:48, 9 March 2012

Project name <html><img src="/images/9/94/Report.png" border="0" /></html> Main project page
<html><img src="/images/c/c3/Resultset_previous.png" border="0" /></html>Previous entry<html>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</html>Next entry<html><img src="/images/5/5c/Resultset_next.png" border="0" /></html>

Relationship Between Score and Signal Value

  • I've made a recent observation as I was making graphs on excel. As I was changing the score and signal values I discovered that the two actually do correlate with each other. For example, when the signal value is set to 4 or greater and the score is set to 160 or greater the only signal values that are passing through are mostly 8 or greater. Same thing happened for the signal value of 5. Interestingly enough, let's say the signal value is 4 and the score is 160 and the signal value is 5 and the score is 160. They return the same amount of hits at 7563. I think at this point I will be ignoring score for the data and only setting signal value cutoffs (I will choose a signal value of 5 for now). Also to be noted is that if the signal is at 5 that means changing the score cutoff will not affect the amount of hits returned until the score is 140 or greater. Same for a signal value of 4, the amount of hits returned are the same until the score is 130 or greater.