Haynes Lab:Notebook/Synthetic Biology and Bioinformatics for Predictable Control of Therapeutic Genes/2012/06/17: Difference between revisions
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==Gene | ==Gene Coordinates/Additional Cell Lines== | ||
* These will be the gene coordinates (+/-250bps of the promoter region) to be used every time a calibration for a cell line is needed | * These will be the gene coordinates (+/-250bps of the promoter region) to be used every time a calibration for a cell line is needed | ||
* Note: These coordinates are based | * Note: These coordinates are based off of the RefSeq genes | ||
[[Image:Screen_Shot_2012-06-17_at_8.47.49_PM.png]] | [[Image:Screen_Shot_2012-06-17_at_8.47.49_PM.png]] | ||
*Behzad's U2OS cell line, which is cancerous, is having problems picking up any signal for commonly known silenced genes. | |||
*I ran a calibration on other cancerous cell lines, and I seem to be having the same problem. Refer to paper: http://cancerres.aacrjournals.org/content/67/11/5097.full | |||
[[Image:Screen_Shot_2012-06-17_at_8.53.25_PM.png]] | |||
Revision as of 20:55, 17 June 2012
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Gene Coordinates/Additional Cell Lines
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