Hlavacek

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(Research Interests)
(Selected Publications)
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==Selected Publications==
==Selected Publications==
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*Hlavacek WS, Faeder JR, Blinov ML, Posner RG, Hucka M, Fontana W (2006) Rules for modeling signal-transduction systems. [http://stke.sciencemag.org/ Sci STKE] '''2006''', re6. PMID 16849649
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*Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. [Nucleic Acids Res] [http://nar.oxfordjournals.org/content/early/2012/08/24/nar.gks771.full?keytype=ref&ijkey=uzonNxxOdtYY6JN doi: 10.1093/nar/gks771]
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*Wall ME, Hlavacek WS, Savageau MA (2004) Design of gene circuits: lessons from bacteria. [http://www.nature.com/nrg/index.html Nat Rev Genet] '''5''', 34-42 PMID 14708014
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*Hlavacek WS, Faeder JR, Blinov ML, Posner RG, Hucka M, Fontana W (2006) Rules for modeling signal-transduction systems. [http://stke.sciencemag.org/ Science's STKE] '''2006''', re6. PMID 16849649
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Revision as of 22:29, 6 December 2012

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Research Interests

Modeling of cellular regulatory systems

  • Biomolecular site dynamics
  • Cell signaling in immmunity and cancer
  • Autophagy
  • Computational methods and software tools

Bioinformatics

  • TF binding site prediction

Selected Publications

  • Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. [Nucleic Acids Res] doi: 10.1093/nar/gks771
  • Hlavacek WS, Faeder JR, Blinov ML, Posner RG, Hucka M, Fontana W (2006) Rules for modeling signal-transduction systems. Science's STKE 2006, re6. PMID 16849649


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