Hlavacek: Difference between revisions
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==Selected Publications== | ==Selected Publications== | ||
*Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. [Nucleic Acids Res] [http://nar.oxfordjournals.org/content/early/2012/08/24/nar.gks771.full?keytype=ref&ijkey=uzonNxxOdtYY6JN doi: 10.1093/nar/gks771] | *Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. [http://nar.oxfordjournals.org/ Nucleic Acids Res] [http://nar.oxfordjournals.org/content/early/2012/08/24/nar.gks771.full?keytype=ref&ijkey=uzonNxxOdtYY6JN doi: 10.1093/nar/gks771] PMID 22923524 | ||
*Martin KR, Barua D, Kauffman AL, Westrate LM, Posner RG, Hlavacek WS, MacKeigan JP (2013) Computational model for autophagic vesicle dynamics in single cells. [http://www.landesbioscience.com/journals/autophagy/ Autophagy] '''9''', 74-92. PMID 23196898 | |||
*Hlavacek WS, Faeder JR, Blinov ML, Posner RG, Hucka M, Fontana W (2006) Rules for modeling signal-transduction systems. [http://stke.sciencemag.org/ Science's STKE] '''2006''', re6. PMID 16849649 | *Hlavacek WS, Faeder JR, Blinov ML, Posner RG, Hucka M, Fontana W (2006) Rules for modeling signal-transduction systems. [http://stke.sciencemag.org/ Science's STKE] '''2006''', re6. PMID 16849649 | ||
Revision as of 19:33, 6 December 2012
Research Interests
Modeling of cellular regulatory systems
- Biomolecular site dynamics
- Cell signaling in immmunity and cancer
- Autophagy
- Computational methods and software tools
Bioinformatics
- TF binding site prediction
Selected Publications
- Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. Nucleic Acids Res doi: 10.1093/nar/gks771 PMID 22923524
- Martin KR, Barua D, Kauffman AL, Westrate LM, Posner RG, Hlavacek WS, MacKeigan JP (2013) Computational model for autophagic vesicle dynamics in single cells. Autophagy 9, 74-92. PMID 23196898
- Hlavacek WS, Faeder JR, Blinov ML, Posner RG, Hucka M, Fontana W (2006) Rules for modeling signal-transduction systems. Science's STKE 2006, re6. PMID 16849649
