IGEM:Arizona State/2014/Notebook/asu igem 2014/2014/07/14: Difference between revisions
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|style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;"> Project name</span> | |style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;"> Project name</span> | ||
|style="background-color: #F2F2F2" align="center"| | |style="background-color: #F2F2F2" align="center"|[[File:Report.png|frameless|link={{#sub:{{FULLPAGENAME}}|0|-11}}]][[{{#sub:{{FULLPAGENAME}}|0|-11}}|Main project page]]<br />{{#if:{{#lnpreventry:{{FULLPAGENAME}}}}|[[File:Resultset_previous.png|frameless|link={{#lnpreventry:{{FULLPAGENAME}}}}]][[{{#lnpreventry:{{FULLPAGENAME}}}}{{!}}Previous entry]] }}{{#if:{{#lnnextentry:{{FULLPAGENAME}}}}|[[{{#lnnextentry:{{FULLPAGENAME}}}}{{!}}Next entry]][[File:Resultset_next.png|frameless|link={{#lnnextentry:{{FULLPAGENAME}}}}]]}} | ||
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== | ==TesA, RBS Digests== | ||
# Made LB agar plates | |||
1 L of distilled water, 35 grams of LB agar powder. Autoclave for 30 minutes. | #*1 L of distilled water, 35 grams of LB agar powder. Autoclave for 30 minutes. | ||
# Ran Digestion of TesA and RBS | |||
#*Cut TesA at X, P and RBS at S, P. | |||
#*After the digestion, the DNA was extracted, taking the 651 bp TesA part from both iGEM and Haynes PstI lanes. RBS was also extracted from both sets of lanes (only vector remained). | |||
#*DNA was stored in the freezer overnight to await ligation | |||
Note: in order to ensure the viability of our PstI enzyme, we ran a control with some PstI from Haynes lab. Results are shown below. the PstI of Haynes lab had full digestion, while the iGEM PstI had a small amount of partial digestion, as made manifest by the three bands of the TesA in lane 2 of the gel. | |||
Note: in order to ensure the viability of our PstI enzyme, we ran a control with some PstI from Haynes lab. Results are shown below. the PstI of Haynes lab had full digestion, while the iGEM PstI had a small amount of partial digestion, as made manifest by the three bands of the TesA in lane 2 of the gel.[[image:14_gel_.jpg|400px| | |||
{| {{table}} border="1" cellspacing="3" <!-- Digest check rxn. table --> | |||
|- valign="top" | |||
| bgcolor=#cfcfcf | Reagent | |||
| bgcolor=#cfcfcf | RBS (μL) | |||
| bgcolor=#cfcfcf | TesA (μL) | |||
| rowspan="7" | <u>'''Lanes'''</u><br>Our PstI:<br>1. 1kb ladder<br>2. TesA (651 bp)<br> 3. RBS (2083)<br>Haynes PstI:<br> 4. TesA (651 bp)<br> 5. RBS (2083 bp)<br> 6. Repeat of 5 <br> | |||
| rowspan="7" | [[image:14_gel_.jpg|400px|gel]]<br> 15 μL/lane; 1% agarose;[http://openwetware.org/wiki/Image:KAH_Fermentas_GeneRuler_1kbplus.jpg Ladder] | |||
|- | |||
| DNA(plasmid) || 10.0 || 10.0 | |||
|- | |||
| 10X FD buffer || 2.0 || 2.0 | |||
|- | |||
| Enzyme # 1 || SpeI: 1.0 || XbaI: 1.0 | |||
|- | |||
| PstI || 1.0 || 1.0 | |||
|- | |||
| dH<sub>2</sub>O || 6.0 || 6.0 | |||
|- | |||
|| || 20 μL @ 42°C/ ~1 Hr. | |||
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Latest revision as of 00:06, 27 September 2017
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TesA, RBS Digests
Note: in order to ensure the viability of our PstI enzyme, we ran a control with some PstI from Haynes lab. Results are shown below. the PstI of Haynes lab had full digestion, while the iGEM PstI had a small amount of partial digestion, as made manifest by the three bands of the TesA in lane 2 of the gel.
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