IGEM:Caltech/2008/Notes: Difference between revisions
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!2007 Paris | !2007 Paris | ||
|[http://parts.mit.edu/igem07/index.php/Paris Wiki]|| Doug || | |[http://parts.mit.edu/igem07/index.php/Paris Wiki]|| Doug ||[[Media:Paris_iGEM_Presentation_-_041708.ppt|Paris 2007]] | ||
|- | |- | ||
!2007 Peking | !2007 Peking | ||
|[http://parts.mit.edu/igem07/index.php/Peking Wiki]|| Allen || | |[http://parts.mit.edu/igem07/index.php/Peking Wiki]|| Allen ||[[Media:Allen_bkgd.ppt|Peking 2007]] | ||
|- | |- | ||
!2007 Caltech | !2007 Caltech | ||
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|- | |- | ||
!2006 MIT | !2006 MIT | ||
|[[IGEM:MIT/2006|Wiki]]|| Robert || | |[[IGEM:MIT/2006|Wiki]]|| Robert ||[[Media:Ovadia.pdf|MIT 2006]] | ||
|- | |- | ||
!2006 UCSF | !2006 UCSF | ||
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|- | |- | ||
!2006 Berkeley | !2006 Berkeley | ||
|[http://parts2.mit.edu/wiki/index.php/University_of_California_Berkeley_2006 Wiki]|| Fei || | |[http://parts2.mit.edu/wiki/index.php/University_of_California_Berkeley_2006 Wiki]|| Fei ||[[Media:Project Review.ppt|Berkeley 2006]] | ||
|- | |- | ||
!2006 UT-Austin | !2006 UT-Austin | ||
|[http://parts.mit.edu/wiki/index.php/University_of_Texas_2006 Wiki]|| Victoria || | |[http://parts.mit.edu/wiki/index.php/University_of_Texas_2006 Wiki]|| Victoria ||[[Media:Vhsiao-UTAustin.ppt|UT-Austin 2006]] | ||
|} | |||
*I'd be willing to also look over USCF if we need to cover all the presentations. - Allem | |||
*I would also be willing to team up with Allen to present UCSF's 2007 Presentation if it's OK with everyone. - Robert | |||
*In regard to the latest email, I'll just do Peking's ppt. -Allen | |||
==4.24.08== | |||
Papers: | |||
{| border="1" | |||
!Presenter!! Paper !! Presentation | |||
|- | |||
!Allen | |||
| Construction of a genetic toggle switch in E. coli || [[Media:Allen_Switch.ppt| Toggle Switch]] | |||
|- | |||
!Doug | |||
| Dispersing biofilms with engineered enzymatic bacteriophage ||[[Media:Dispersing_biofilms_with_engineered_enzymatic_bacteriophages.ppt|Destroying Biofilms]] | |||
|- | |||
!Fei | |||
| A synthetic gene-metabolic oscillator. Nature 2005 May 5; 435(7038) 118-22. || [[Media:A synthetic Gene-Metabolic Oscillator.ppt]] | |||
|- | |||
!Robert | |||
| <i>Environmentally controlled invasion of cancer cells by engineered bacteria.</i> || | |||
[[Media:Invasion_of_Cancer_Cells.ppt|Invasion of Cancer Cells]] | |||
|- | |||
!Victoria | |||
| ''Programmed Population Control by Cell-Cell Communication and Regulated Killing''|| [[Media:Vhsiao_-_Programmed_population_control_by_cell-cell_communication_and_regulated.ppt|Programmed Population Control]] | |||
|} | |||
==5.1.08== | |||
*Josh: [[Media:5_1_08_JKM.ppt| Sample Presentation #1]] | |||
*Chase: [[Media:Super_sensors.ppt| Sample Presentation #2]] | |||
==5.8.08== | |||
*An incomplete list of project ideas is below. Pick one, or add your own. | |||
*#Bactofood (food supplement) | |||
*#Mouthwash (and/or deodorant) | |||
*#Gut flora engineering | |||
*#CO2 mineralization | |||
*#Healthbots (patrolling the blood stream) | |||
Remember, describe the 'big picture' idea, then try to break it down into smaller projects. First look at large pieces - what kinds of abilities would you need (bind to X, produce Y, destroy Z) to accomplish the big picture? Next, think about how you'd produce those abilities (protein α will bind to X, pathway β would produce Y, etc). Bonus points if you can break it down into five separate mini-projects. More bonus points if things would still work with less-than-total success (we need A and B to work to declare success, but C and D would make it cooler. E would be awesome and interesting even if nothing else worked). | |||
{| border="1" | |||
!Presenter!! Project Idea !! Presentation | |||
|- | |||
!Allen | |||
| Varied State Expressions || [[Media:Allen3.ppt | State Exp]] | |||
|- | |||
!Doug | |||
| Healthbots|| [[Media:Healthbots_050808.ppt| Healthbots]] | |||
|- | |||
!Fei | |||
| Gut Flora engineering|| [[Media:Engineering_Gut_Microbiota.ppt]] | |||
|- | |||
!Robert | |||
| Mouthwash || [[Media:Plaque_Biofilms.ppt| Mouthwash!]] | |||
|- | |||
!Victoria | |||
| CO2 mineralization || [[Media:CO2_Mineralization.ppt| CO2 Mineralization]] | |||
|} | |||
==5.15.08== | |||
*Ideas: | |||
*#Mouthwash | |||
*#Bioremediation | |||
*#Gut flora | |||
*#Diabetes | |||
*Allen: | |||
*Doug: [[Media:Artificial_White_Blood_Cell.ppt| Artificial White Blood Cells]] | |||
*Fei: [[Media:Engineering_Gut_Microbiota.ppt|Gut Flora]] | |||
*Robert: [[Media:Mouthwash.ppt | Mouthwash: A Closer Look at Biofilms]] | |||
*Victoria: [[Media:bioremediation.ppt | Bioremediation]] | |||
==6.5.08== | |||
{| border="1" | |||
!Presenter !! Presentation | |||
|- | |||
!Allen | |||
| [[Media:Lin_06-05-08_Presenatation.ppt | Pop var]] | [[Media:Lin_06-05-08_Presenatation_Append.ppt | Extra]] | |||
|- | |||
!Doug | |||
| [[Media:ROS_System_Design_060508.ppt| ROS]] | |||
|- | |||
!Fei | |||
| | |||
|- | |||
!Robert | |||
| [[Media:LactoseIntolerance.ppt|Lactose Intolerance]] | |||
|- | |||
!Victoria | |||
| [[Media:Vitamin_Production.ppt|Vitamin Production]] | |||
|} | |} | ||
==6.12.08== | |||
Victoria |[[Media:Folate_Production_and_Lysis.ppt| Folate Production]] <br> | |||
Allen |[[Media:Lin_061308.ppt | Pop var]] | |||
==6.18.08== | |||
Lab jobs | |||
#LB agar + antibiotic plates : Robert | |||
#LB media + sterile water : Victoria | |||
#Wash and autoclave glassware : Fei + Allen | |||
#Autoclave tips + waste + glass beads, water bath : Doug | |||
==Background reading== | ==Background reading== |
Latest revision as of 12:16, 6 August 2008
4.14.08: Previous projects
4.24.08Papers:
5.1.08
5.8.08
Remember, describe the 'big picture' idea, then try to break it down into smaller projects. First look at large pieces - what kinds of abilities would you need (bind to X, produce Y, destroy Z) to accomplish the big picture? Next, think about how you'd produce those abilities (protein α will bind to X, pathway β would produce Y, etc). Bonus points if you can break it down into five separate mini-projects. More bonus points if things would still work with less-than-total success (we need A and B to work to declare success, but C and D would make it cooler. E would be awesome and interesting even if nothing else worked).
5.15.08
6.5.08
6.12.08Victoria | Folate Production 6.18.08Lab jobs
Background reading
|