IGEM:Groningen/Notebook/iGEM 2011/2011/06/20

20-6-11

PCRs with different samples, scheme:
Samples PhybB: DNA TG1 3×TG1 Colony DH5alpha 3× colonies DH5alpha
pfu 10× buffer: 5μl 15μl 5μl 15μl
dNTPs 10mM: 1μl 3μl 1μl 3μl
Forward Biobrick primer: 1μl 3μl 1μl 3μl
Reverse Biobrick primer: 1μl 3μl 1μl 3μl
Pfu DNA polymerase: 1μl 3μl 1μl 3μl
MQ water: 41μl 123μl 41μl 123μl

PBAD and PlasI PCRs:
pfu 10× buffer: 5μl
dNTPs 10mM: 1μl
Forward Biobrick primer: 1μl
Reverse Biobrick primer: 1μl
Pfu DNA polymerase: 1μl
MQ water: 41μl

PCR conditions:
Preheated lid: 111°C
Denaturation: 95°C for 3 min.
Cycle 33×:
denaturation: 95°C for 30s.
annealing: 60°C for 30s.
Extension: 72°C for 2.5 min.
Final extension: 72°C for 10 min.
Store infinite at 4°C

Analyse samples on a 1% agarose gel
Clean up the DNA samples
work on human practices