IGEM:Groningen/Notebook/iGEM 2011/2011/07/22: Difference between revisions

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==Entry title==
==22-07-11==
* Insert content here...
<br>
 
<br> Plates of transformants with LasR-LVA DT vector look good, since the self ligation plates don't have much colonies!
<br> 10μl plate is empty on self ligation plate control! 90μl plate has a few colonies (5)
<br> Colony PCR as usual
<br>
<br> Digestion PBAD, PhybB and vectors: cI-LVA and RBS-GFP
<br>
<br>PBAD:
<br> 15μl PBAD
<br> 1μl SpeI
<br> 2μl Tango buffer
<br> 2μ MQ water
<br>
<br>PhybB
<br> 3μl PhybB
<br> 1μl SpeI
<br> 2μl Tango buffer
<br> 14μl MQ water
<br>
<br> After 1h and 50 minutes: put 2.5μl Tango buffer+ 1μl EcoRI in these samples and digest for another 1h and 50 minm.
<br> DNA clean up with kit of Roche.
<br>
<br> Ligation:
<br> PBAD-cI-LVA-DT
<br> 6μl PBAD
<br> 8.5μl cI-LVA-DT vector
<br> 2μl T4 DNA ligase buffer
<br> 1μl T4 DNA ligase
<br> 2.5μl MQ water
<br>
<br> PhybB-cI-LVA-DT
<br> 6μl PhybB
<br> 8.5μl cI-LVA-DT vector
<br> 2μl T4 DNA ligase buffer
<br> 1μl T4 DNA ligase
<br> 2.5μl MQ water
<br>
<br> PBAD-RBS-GFP-DT
<br> 6.2μl PhybB
<br> 8.5μl cI-LVA-DT vector
<br> 2μl T4 DNA ligase buffer
<br> 1μl T4 DNA ligase
<br> 2.3μl MQ water
<br>
<br> Ligate for 30 to 45 minutes
<br>
<br> Transformation as usual
<br>


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Revision as of 02:38, 22 July 2011

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22-07-11



Plates of transformants with LasR-LVA DT vector look good, since the self ligation plates don't have much colonies!
10μl plate is empty on self ligation plate control! 90μl plate has a few colonies (5)
Colony PCR as usual

Digestion PBAD, PhybB and vectors: cI-LVA and RBS-GFP

PBAD:
15μl PBAD
1μl SpeI
2μl Tango buffer
2μ MQ water

PhybB
3μl PhybB
1μl SpeI
2μl Tango buffer
14μl MQ water

After 1h and 50 minutes: put 2.5μl Tango buffer+ 1μl EcoRI in these samples and digest for another 1h and 50 minm.
DNA clean up with kit of Roche.

Ligation:
PBAD-cI-LVA-DT
6μl PBAD
8.5μl cI-LVA-DT vector
2μl T4 DNA ligase buffer
1μl T4 DNA ligase
2.5μl MQ water

PhybB-cI-LVA-DT
6μl PhybB
8.5μl cI-LVA-DT vector
2μl T4 DNA ligase buffer
1μl T4 DNA ligase
2.5μl MQ water

PBAD-RBS-GFP-DT
6.2μl PhybB
8.5μl cI-LVA-DT vector
2μl T4 DNA ligase buffer
1μl T4 DNA ligase
2.3μl MQ water

Ligate for 30 to 45 minutes

Transformation as usual