IGEM:Hong Kong HKUST/2008: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
No edit summary
No edit summary
(58 intermediate revisions by 4 users not shown)
Line 14: Line 14:


===IMPORTANT ANNOUNCEMENT===
===IMPORTANT ANNOUNCEMENT===
*New Semester started and the meeting time and place changed to every Saturday 2-4p.m.
*Anyone cannot attend the meeting, plz email us one day before the meeting.




Line 19: Line 21:
{| cellspacing="5"
{| cellspacing="5"
|width="250px" class="blue" |  
|width="250px" class="blue" |  
==Project Description==
The HKUSTers’ project is composed of three components; (1) a Randomizer with one of the two possible random outputs at a single cell level, (2) a Memorizer that specifically records the last input and compares it with the current input to give out an XOR calculation, while the input before the last is erased, and (3) a Spatial Oscillator that facilitates autonomous back and forth migration of cells responding to two opposing chemical gradients...
For more details:[[../Project Description|Project Description]]
<!-- RESOURCES HEADER with edit link-->
<!-- RESOURCES HEADER with edit link-->
<h3><html>
<h3><html>
Line 64: Line 76:
*May 15 - BioBrick parts sent to teams
*May 15 - BioBrick parts sent to teams
*May 15 - Team rosters due
*May 15 - Team rosters due
*'''July 1 - Registration fee due'''
*July 1 - Registration fee due  
*'''July 1 - Team project descriptions due'''
*July 1 - Team project descriptions due
*'''September 1 - Final team roster due'''
*October 8 - Notice and description of any use of non-standard parts or devices schemes due
*'''October 1 - Jamboree attendance fees due'''
*October 15 - Final team roster due
*'''October 1 - Notice and description of any use of non-standard parts or devices schemes due '''
*October 29 - Project and part documentation due
*'''October 15 - Project Summary form due'''
*October 29 - BioBrick Part DNA received by the Registry
*'''October 29 - Project and part documentation due'''
*'''October 29 - BioBrick Part DNA received by the Registry'''
*'''November 8-9 - iGEM competition Jamboree, MIT, USA'''
*'''November 8-9 - iGEM competition Jamboree, MIT, USA'''




=== Want to join the iGEM team? ===
*'''Undergraduate and graduate''' willing to work are welcome to join us.


<html>
<html>
Line 110: Line 118:
#[[../June_23|June 23]]
#[[../June_23|June 23]]
#[[../June_25|June 25 (Meeting with high school students)]]
#[[../June_25|June 25 (Meeting with high school students)]]
...
#[[../June_30|June 30]]
#[[../July_4|July 4]]
#[[../July_9|July 9]]
#[[../July_21|July 21]]
#[[../July_23|July 23]]
#[[../Aug_1|Aug 1]]
#[[../Aug_11|Aug 11 (Biochem stu sub-meeting)]]
#[[../Aug_13|Aug 13]]
#[[../Aug_19|Aug 19 (Biochem sub-meeting)]]
#[[../Aug_22|Aug 22 (Changed to Aug 29 due to Typhoon Signal No.8)]]
#[[../Sep_6|Sep 6]]
#[[../Sep_13|Sep 13]]
#[[../Sep_20|Sep 20]]
#[[../Sep_27|Sep 27]]
#[[../Oct_4|Oct 4]]
#[[../Oct_14|Oct 14]]
#[[../Oct_18|Oct 18]]
#[[../Oct_26|Oct 26]]
#[[../Oct_30|Oct 30]]
#[[../Nov_2|Nov 2]]
 


===Tutorials===
===Tutorials===
Line 116: Line 144:
#June 4 [[/Image:Media-Digital_Circuit.ppt|Digital Circuit]] by Jiahui
#June 4 [[/Image:Media-Digital_Circuit.ppt|Digital Circuit]] by Jiahui
#June 13 by Wisely
#June 13 by Wisely
===Agendas===
#March 23 [[Image:Agenda 01 HKUST iGem2009 Competition.doc]] by Tony
#April 2  [[Image:Agenda 02 HKUST iGem2009 Competition.doc]] by Tony
#April 6 [[Image:Agenda 03 HKUST iGem2009 Competition.doc]] by Tony
#April 16  [[Image:Agenda 04 HKUST iGem2009 Competition.doc]] by Tony
#April 23  [[Image:Agenda 05 HKUST iGem2009 Competition.doc]] by Huilin
#April 30  [[Image:Agenda 06 HKUST iGem2009 Competition.doc]] by Huilin
#May 14  [[Image:Agenda 08 HKUST iGem2009 Competition.doc]] by Tony
#June 6  [[Image:Agenda 09 HKUST iGem2009 Competition.doc]] by Huilin
#June 11  [[Image:Agenda 10 HKUST iGem2009 Competition.doc]] by Huilin
#June 18  [[Image:Agenda 11 HKUST iGem2009 Competition.doc]] by Huilin
#June 25  [[Image:Agenda 12 HKUST iGem2009 Competition.doc]] by Huilin
#July 2  [[Image:Agenda 13 HKUST iGem2009 Competition.doc]] by Huilin
#July 9  [[Image:Agenda 14 HKUST iGem2009 Competition.doc]] by Huilin
===Minutes===
#March 23 [[Image:Minute 01 HKUST iGem2009 Competition.doc]] by Tony
#April 2  [[Image:Minute 02 HKUST iGem2009 Competition.doc]] by Tony
#April 6 [[Image:Minute 03 HKUST iGem2009 Competition.doc]] by Tony
#April 16  [[Image:Minute 04 HKUST iGem2009 Competition.doc]] by Tony
#April 23  [[Image:Minute 05 HKUST iGem2009 Competition.doc]] by Huilin
#May 7  [[Image:Minute 07 HKUST iGem2009 Competition.doc]] by Tony
#May 14  [[Image:Minute 08 HKUST iGem2009 Competition.doc]] by Huilin
#June 6  [[Image:Minute 09 HKUST iGem2009 Competition.doc]] by Huilin
#June 11  [[Image:Minute 10 HKUST iGem2009 Competition.doc]] by Huilin
#June 18  [[Image:Minute 11 HKUST iGem2009 Competition.doc]] by Huilin
#June 25  [[Image:Minute 12 HKUST iGem2009 Competition.doc]] by Huilin
#June 25  [[Image:Minute 12 HKUST iGem2009 Competition Admened.doc]] by Huilin
#July 2  [[Image:Minute 13 HKUST iGem2009 Competition.doc]] by Huilin




Line 125: Line 184:
*[http://openwetware.org/wiki/Image:2008_predator-prey_msb200824.pdf 2008_predator-prey_msb200824.pdf]
*[http://openwetware.org/wiki/Image:2008_predator-prey_msb200824.pdf 2008_predator-prey_msb200824.pdf]
*[http://openwetware.org/wiki/Image:2008_MolMem-fluct_Science.pdf 2008_MolMem-fluct_Science.pdf]
*[http://openwetware.org/wiki/Image:2008_MolMem-fluct_Science.pdf 2008_MolMem-fluct_Science.pdf]
*[http://openwetware.org/wiki/Image:Autoinducer-2.pdf]
*Autoinducer-2:[http://openwetware.org/wiki/Image:Autoinducer-2.pdf]
*Bacterial two-hybrid system:[http://www.pnas.org/cgi/content/full/97/13/7382]
*Bacterial two-hybrid system:[http://www.pnas.org/cgi/content/full/97/13/7382]
*Stochastic Gene Expression in a Single Cell:[http://www.sciencemag.org/cgi/content/full/297/5584/1183]
*Ptashne,  ''Genetic Switch 3rd ED'', QR342. P83 2004 (CALL No. in HKUST Library)


===Single copy plasmid--Reference===
*[[Bacterial artificial chromosomes]]: BAC
*Berki 07 iGEM ~ Controller: BAC origin
*P1 origin
*miniF plasmid


*Integration:[http://jb.asm.org/cgi/content/full/182/3/842#F2|Lambda InCh, a simple ''E.coli'' Plasmid-Chromosome Shuttle System]
===Primers===
[[../Primers]]


|width="250px" class="blue" |
|width="250px" class="blue" |
<!-- Uni. info HEADER with edit link-->
<!-- Uni. info HEADER with edit link-->


<html>
<img src="http://www.ust.hk/HKUST_Forum/images/ustlogo.gif" alt="HKUST">
</html>


<h3>About HKUST</h3>
<h2>HKUST</h2>
<hr/>
 
<!-- END Uni. info HEADER with edit link-->
<!-- END Uni. info HEADER with edit link-->
http://www.ust.hk/HKUST_Forum/images/ustlogo.gif


Hong Kong University of Science and Technology[http://www.ust.hk]
Hong Kong University of Science and Technology[http://www.ust.hk]


Clear Water Bay, Kowloon, Hong Kong
Clear Water Bay, Kowloon, Hong Kong




Line 156: Line 230:
'''[[Media:HKUST.jpg|Picture of HKUSTers-2008 (coming soon!)]]'''
'''[[Media:HKUST.jpg|Picture of HKUSTers-2008 (coming soon!)]]'''


===Students===
 
 
 
 
 
===PG Students===
*[[User:HO Wai Pang|Wai Pang HO, Tony]]
 
===UG Students===
*[[User:Jean_Wang|Jinyu WANG, Jean]]
*[[User:Jean_Wang|Jinyu WANG, Jean]]
*[[User:Xiuye_Chen|Xiuye Chen, Silvia]]
*[[User:Xiuye_Chen|Xiuye Chen, Silvia]]
*[[User:??|Jingjing Wu, Sherry]]
*[[User:Jingjing_Wu|Jingjing Wu, Sherry]]
*[[User:??|Haoyue Yu, Cotton]]
*[[User:Haoyue_Yu|Haoyue Yu, Cotton]]
*[[User:Qing_Sheng|Qing Sheng]]
*[[User:Qing_Sheng|Qing Sheng]]
*[[User:Jiahui_Shi|Jiahui Shi]]
*[[User:Jiahui_Shi|Jiahui Shi]]
*[[User:GUO_Jiawen|Jiawen Guo, Carmen]]
*[[User:GUO_Jiawen|Jiawen Guo, Carmen]]
*[[User:TIAN_Guangnan_Richard|Guangnan Tian, Richard]]
*[[User:TIAN_Guangnan_Richard|Guangnan Tian, Richard]]
*[[User:??|Shui Chung CHOY, Wisely]]
*[[User:Shui_Chung_CHOY|Shui Chung CHOY, Wisely]]
*[[User:Wei Zheng|Wei ZHENG, Winnie]]
*[[User:Wei Zheng|Wei ZHENG, Winnie]]
===High School students===
*[[User:HOI Sunny|HOI Sunny]]
*[[User:NGAI Vivian|NGAI Vivian]]
*[[User:WONG Gladys|WONG Gladys]]




===Grad Advisors===


==Faculty Advisors==
==Faculty Advisors==
*[[User:??|King L. Chow]][http://www.ust.hk/~webbo/faculty/Dr.Chow/index.html]
*King L. Chow [http://www.ust.hk/~webbo/faculty/Dr.Chow/index.html]
 
 
 
<h2>Sponsor</h2>
 
We are grateful to the generous sponsorship and support from the *Lee Hysan Foundation*. 
 
 
 





Revision as of 22:03, 8 July 2009


Welcome to HKUSTers team Wiki for iGEM 2008

  • iGEM is the international genetically engineered machines competition.
  • The objective of the competition is to design and build an engineered biological system using DNA.
  • To see examples of the amazing possibilities of iGEM, check out last years iGEM page

IMPORTANT ANNOUNCEMENT

  • New Semester started and the meeting time and place changed to every Saturday 2-4p.m.
  • Anyone cannot attend the meeting, plz email us one day before the meeting.



Project Description

The HKUSTers’ project is composed of three components; (1) a Randomizer with one of the two possible random outputs at a single cell level, (2) a Memorizer that specifically records the last input and compares it with the current input to give out an XOR calculation, while the input before the last is erased, and (3) a Spatial Oscillator that facilitates autonomous back and forth migration of cells responding to two opposing chemical gradients...

For more details:[[../Project Description|Project Description]]



<html> <img src="http://openwetware.org/images/b/b9/Icon_board.png" alt="Resources"> </html>Resources


Interested in learning more about iGEM 2008? Explore below for an example of what's possible.

For more info on this year's iGEM please see 2008.igem.org.

Many more valuable links and helpful tidbits are available at the iGEM Resources page


External links

For visitors

Internal links

  • [[../2008/Notebook|Team Notebook]]


<html> <img src="http://openwetware.org/images/e/e2/Icon_info.png" alt="INFORMATION" border="0"> </html>Information


Schedule

  • April 18 - iGEM registration opens
  • May 9 - Registration closes
  • May 15 - BioBrick parts sent to teams
  • May 15 - Team rosters due
  • July 1 - Registration fee due
  • July 1 - Team project descriptions due
  • October 8 - Notice and description of any use of non-standard parts or devices schemes due
  • October 15 - Final team roster due
  • October 29 - Project and part documentation due
  • October 29 - BioBrick Part DNA received by the Registry
  • November 8-9 - iGEM competition Jamboree, MIT, USA


<html> <script language="JAVASCRIPT"><!-- update your browser, silly--> Today = new Date(); Jamboree = new Date("November 8, 2008"); msInADay = 1000 * 60 * 60 * 24; display = Math.floor((Jamboree.getTime() - Today.getTime())/msInADay); document.write("There are " + display +" days left until the Jamboree!"); // </script> </html>



Brainstorming


Meetings

  1. [[../April_23|April 23]]
  2. [[../April_28|April 28]]
  3. [[../May_5|May 5]]
  4. [[../May_16|May 16]]
  5. [[../June_2|June 2]]
  6. [[../June_4|June 4]]
  7. [[../June_13|June 13]]
  8. [[../June_15|June 15]]
  9. [[../June_18|June 18]]
  10. [[../June_20|June 20]]
  11. [[../June_23|June 23]]
  12. [[../June_25|June 25 (Meeting with high school students)]]
  13. [[../June_30|June 30]]
  14. [[../July_4|July 4]]
  15. [[../July_9|July 9]]
  16. [[../July_21|July 21]]
  17. [[../July_23|July 23]]
  18. [[../Aug_1|Aug 1]]
  19. [[../Aug_11|Aug 11 (Biochem stu sub-meeting)]]
  20. [[../Aug_13|Aug 13]]
  21. [[../Aug_19|Aug 19 (Biochem sub-meeting)]]
  22. [[../Aug_22|Aug 22 (Changed to Aug 29 due to Typhoon Signal No.8)]]
  23. [[../Sep_6|Sep 6]]
  24. [[../Sep_13|Sep 13]]
  25. [[../Sep_20|Sep 20]]
  26. [[../Sep_27|Sep 27]]
  27. [[../Oct_4|Oct 4]]
  28. [[../Oct_14|Oct 14]]
  29. [[../Oct_18|Oct 18]]
  30. [[../Oct_26|Oct 26]]
  31. [[../Oct_30|Oct 30]]
  32. [[../Nov_2|Nov 2]]


Tutorials

  1. June 2 Gene Regulation by Qing and Jinyu
  2. June 4 Digital Circuit by Jiahui
  3. June 13 by Wisely

Agendas

  1. March 23 File:Agenda 01 HKUST iGem2009 Competition.doc by Tony
  2. April 2 File:Agenda 02 HKUST iGem2009 Competition.doc by Tony
  3. April 6 File:Agenda 03 HKUST iGem2009 Competition.doc by Tony
  4. April 16 File:Agenda 04 HKUST iGem2009 Competition.doc by Tony
  5. April 23 File:Agenda 05 HKUST iGem2009 Competition.doc by Huilin
  6. April 30 File:Agenda 06 HKUST iGem2009 Competition.doc by Huilin
  7. May 14 File:Agenda 08 HKUST iGem2009 Competition.doc by Tony
  8. June 6 File:Agenda 09 HKUST iGem2009 Competition.doc by Huilin
  9. June 11 File:Agenda 10 HKUST iGem2009 Competition.doc by Huilin
  10. June 18 File:Agenda 11 HKUST iGem2009 Competition.doc by Huilin
  11. June 25 File:Agenda 12 HKUST iGem2009 Competition.doc by Huilin
  12. July 2 File:Agenda 13 HKUST iGem2009 Competition.doc by Huilin
  13. July 9 File:Agenda 14 HKUST iGem2009 Competition.doc by Huilin

Minutes

  1. March 23 File:Minute 01 HKUST iGem2009 Competition.doc by Tony
  2. April 2 File:Minute 02 HKUST iGem2009 Competition.doc by Tony
  3. April 6 File:Minute 03 HKUST iGem2009 Competition.doc by Tony
  4. April 16 File:Minute 04 HKUST iGem2009 Competition.doc by Tony
  5. April 23 File:Minute 05 HKUST iGem2009 Competition.doc by Huilin
  6. May 7 File:Minute 07 HKUST iGem2009 Competition.doc by Tony
  7. May 14 File:Minute 08 HKUST iGem2009 Competition.doc by Huilin
  8. June 6 File:Minute 09 HKUST iGem2009 Competition.doc by Huilin
  9. June 11 File:Minute 10 HKUST iGem2009 Competition.doc by Huilin
  10. June 18 File:Minute 11 HKUST iGem2009 Competition.doc by Huilin
  11. June 25 File:Minute 12 HKUST iGem2009 Competition.doc by Huilin
  12. June 25 File:Minute 12 HKUST iGem2009 Competition Admened.doc by Huilin
  13. July 2 File:Minute 13 HKUST iGem2009 Competition.doc by Huilin


Interesting Reading Materials

Single copy plasmid--Reference

Primers

[[../Primers]]


HKUST


http://www.ust.hk/HKUST_Forum/images/ustlogo.gif

Hong Kong University of Science and Technology[4]

Clear Water Bay, Kowloon, Hong Kong




<html> <img src="http://openwetware.org/images/3/39/Icon_groups.png" alt="People"> </html>People


A group of Science and Engineering undergraduate students from HKUST inspired to make an impact in the iGEM competition.

Picture of HKUSTers-2008 (coming soon!)




PG Students

UG Students

High School students


Faculty Advisors

  • King L. Chow [5]


We are grateful to the generous sponsorship and support from the *Lee Hysan Foundation*.