IGEM:Harvard/2006/Container Design 4/Scaffold Sequences: Difference between revisions
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*[[../Oligo_Paths_and_Sequences|Oligo Paths and Sequences]] | *[[../Oligo_Paths_and_Sequences|Oligo Paths and Sequences]] | ||
*[[Media:IGEM_Harvard_06_oligo_output_for_30hb.txt|Oligo Output for 30hb]] | *[[Media:IGEM_Harvard_06_oligo_output_for_30hb.txt|Oligo Output for 30hb]] | ||
===Sequence Chunks (TChan, 7.5.06)=== | |||
*[[/Oligo_Paths_and_Chunks_TC|Oligo Paths and Chunks (TChan)]] | |||
===Sequence Chunks (TChan, 6.27.06)=== | |||
*[[Media:Chunk1p7308_TC_62706.txt]] | |||
**Chunk of p7308 sequence for container4's lid1. | |||
*[[Media:Chunk2p7308_TC_62706.txt]] | |||
**Chunk of p8256 sequence for container4's barrel (skips 6bp after lid1's chunk, 6bp right before lid2, the 96bp*13helices that is lid2, 6bp after lid2, and appends the final helix). | |||
*[[Media:Chunk3p7308_TC_62706.txt]] | |||
**Chunk of p7308 sequence for container4's lid2. | |||
===Oligos (TChan, 6.27.06)=== | |||
*[[Media:lid1_7308_TC_62706.txt]] | |||
**Oligos for lid 1 (correct wordcount: 30lines, 30words, 1122chars (includes 30 carriage returns) for (96bp-12ssbp)*13helices) | |||
*[[Media:barrel_7308_TC_62706.txt]] | |||
**Oligos for barrel (correct wordcount: 74lines, 74words, 2594chars (includes 74 carriage returns) for (96bp-12ssbp)*30helices) | |||
*[[Media:lid2_7308_TC_62706.txt]] | |||
**Oligos for lid 2 (correct wordcount: 30lines, 30words, 1122chars (includes 30 carriage returns) for (96bp-12ssbp)*13helices) | |||
Revision as of 12:35, 10 July 2006
- Scaffold Sequence
- [[../Oligo_Paths_and_Sequences|Oligo Paths and Sequences]]
- Oligo Output for 30hb
Sequence Chunks (TChan, 7.5.06)
Sequence Chunks (TChan, 6.27.06)
- Media:Chunk1p7308_TC_62706.txt
- Chunk of p7308 sequence for container4's lid1.
- Media:Chunk2p7308_TC_62706.txt
- Chunk of p8256 sequence for container4's barrel (skips 6bp after lid1's chunk, 6bp right before lid2, the 96bp*13helices that is lid2, 6bp after lid2, and appends the final helix).
- Media:Chunk3p7308_TC_62706.txt
- Chunk of p7308 sequence for container4's lid2.
Oligos (TChan, 6.27.06)
- Media:lid1_7308_TC_62706.txt
- Oligos for lid 1 (correct wordcount: 30lines, 30words, 1122chars (includes 30 carriage returns) for (96bp-12ssbp)*13helices)
- Media:barrel_7308_TC_62706.txt
- Oligos for barrel (correct wordcount: 74lines, 74words, 2594chars (includes 74 carriage returns) for (96bp-12ssbp)*30helices)
- Media:lid2_7308_TC_62706.txt
- Oligos for lid 2 (correct wordcount: 30lines, 30words, 1122chars (includes 30 carriage returns) for (96bp-12ssbp)*13helices)
