IGEM:Harvard/2006/DNA nanostructures/Notebook/2006-11-20: Difference between revisions

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[[Image:11-20foldinggel.pic]]
[[Image:11-20foldinggel.pic]]
- results: the folding did not succeed, as can be seen by the lack of bands in the 3rd through 5th lanes near the position of the scaffold
  band

Latest revision as of 12:45, 27 November 2006

Gel Analysis (repeat)

- samples: c5.0A (no lids, no aptamers), c5.0C (no lids, inside aptamers), c5.0D (no lids, outside aptamers)

- 2.0% agarose gel: 2 g agarose + 100 μL 0.5x TBE + 1.1 mL 1 M MgCl2 + 5 μL EtBr

- lanes:

            1 = ladder (10 μL)
            2 = p7308 scaffold (5 μL + 3 μL dye)
            3 = c5.0A (5 μL + 3 μL dye)
            4 = c5.0C (5 μL + 3 μL dye)
            5 = c5.0D (5 μL + 3 μL dye)

- run 1 hr. @ 130 V


- results: the folding did not succeed, as can be seen by the lack of bands in the 3rd through 5th lanes near the position of the scaffold

  band