IGEM:Harvard/2009/Notebook/Harvard iGEM 2010/2010/08/12: Difference between revisions

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*Minipreps of more V9/V10 colonies
*Minipreps of more V9/V10 colonies
*Diagnostic Digest of minipreps w/ Eco and Pst (Should see ~840 and 7000 bp)
*Diagnostic Digest of minipreps w/ Eco and Pst (Should see ~840 and 7000 bp)
[[Image: |240px|diagnostic digest of ihpRNA in agro vectors]]
[[Image: Faildigest.jpg|240px|diagnostic digest of ihpRNA in agro vectors]]


ladder, V92, V92b, V94, V94b, V95, V96b, V97, V97b, V98, V98b
ladder, V92, V92b, V94, V94b, V95, V96b, V97, V97b, V98, V98b
Line 16: Line 16:
Lanes 2&3: LTP (11c1); Lanes 4&5: Bet2 (25c1); Lane 6: Bet2 (25c2); Lane 7: Bet2 (28c1); Lanes 8&9: Ger (36c1); Lanes 10&11 Ger (36c2)
Lanes 2&3: LTP (11c1); Lanes 4&5: Bet2 (25c1); Lane 6: Bet2 (25c2); Lane 7: Bet2 (28c1); Lanes 8&9: Ger (36c1); Lanes 10&11 Ger (36c2)


*Digested V9/V10 backbone for ligations (redoing ihpRNA ligations into V9/V10)
*Digested V9/V10 backbone for ligations w/ Eco & Pst (redoing ihpRNA ligations into V9/V10)
[[Image: |240px|backbone]]
[[Image: 2010-08-12_13hr_10min.jpg|240px|backbone]]


'''amiRNA'''
'''amiRNA'''
Line 29: Line 29:
==Team Fence==
==Team Fence==


[[Image: arp2coloniesligb21.jpg]]
[[Image: arp2coloniesligb21.jpg||350px]]


This picture is not the best picture but we did find colonies on the plate with the arp2/b21 transformation.
This picture is not the best picture but we did find colonies on the plate with the arp2/b21 transformation.


[[Image: 812 5xgaluas.jpg]]


transformation from karmella's stock


===Transformations from yesterday===
 
===Transformations from Yesterday's Ligations===
[[Image:RXRLc_VP16_8-12.jpg||350px]]
[[Image:RXRLc_VP16_8-12.jpg||350px]]
[[Image:Barstar_pCola_lig_8-12.jpg||350px]]
[[Image:Barstar_pCola_lig_8-12.jpg||350px]]
[[Image:EcR-Gal-PhyB_lig_8-12.jpg||350px]]
[[Image:EcR-Gal-PhyB_lig_8-12.jpg||350px]]
[[Image:Untrans_cont_8-12.jpg]]
[[Image:Untrans_cont_8-12.jpg||350px]]
[[Image:Gal4_EcR_lig_8-12.jpg||350px]]
[[Image:Barstar_pDUET_lig_8-12.jpg||350px]]
[[Image:Barstar_pCOLA_lig_from_8-10.jpg||350px]]
[[Image:V26_cont_8-12.jpg||350px]]
[[Image:VP16_cont_lig_8-12.jpg||350px]]
[[Image:ACC_-_Barnase_lig_8-12.jpg||350px]]
[[Image:Barnase_cont_lig_8-12.jpg||350px]]
[[Image:Barnase_pDUET_8-12.jpg||350px]]
[[Image:RXRLc_VP16_lig_8-12.jpg||350px]]
[[Image:PhyB_cont_lig_8-12.jpg||350px]]
[[Image:V24_Control_lig_8-12.jpg||350px]]
 
 
 
Colonies beyond control on RXRLc VP16, Barstar V26, and EcR-Gal-PhyB.
 


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Revision as of 12:07, 18 August 2010

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Team Allergy

ihpRNA

  • Minipreps of more V9/V10 colonies
  • Diagnostic Digest of minipreps w/ Eco and Pst (Should see ~840 and 7000 bp)

diagnostic digest of ihpRNA in agro vectors

ladder, V92, V92b, V94, V94b, V95, V96b, V97, V97b, V98, V98b

Lanes 2&3: LTP (11c1); Lanes 4&5: Bet2 (25c1); Lane 6: Bet2 (25c2); Lane 7: Bet2 (28c1); Lanes 8&9: Ger (36c1); Lanes 10&11 Ger (36c2)

  • Digested V9/V10 backbone for ligations w/ Eco & Pst (redoing ihpRNA ligations into V9/V10)

backbone

amiRNA

  • Ligated into V9/V10 and transformed (mutagenesis sites confirmed through pcr using 20 bp sepecific primers)
    • still need to be sequenced


[[Image:

Team Fence

This picture is not the best picture but we did find colonies on the plate with the arp2/b21 transformation.

transformation from karmella's stock


Transformations from Yesterday's Ligations


Colonies beyond control on RXRLc VP16, Barstar V26, and EcR-Gal-PhyB.