IGEM:IMPERIAL/2006/Sandbox

From OpenWetWare

< IGEM:IMPERIAL | 2006(Difference between revisions)
Jump to: navigation, search
(Image:Icon_board.png Opinion/Editorial)
Current revision (15:16, 29 October 2006) (view source)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
__NOTOC__
__NOTOC__
-
<br style="clear:both;"/>
 
<center>[[Image:Icolibanner.png|800px]]</center>
<center>[[Image:Icolibanner.png|800px]]</center>
<center><font size="4">the newsletter of Imperial College London iGEM 2006</font></center>
<center><font size="4">the newsletter of Imperial College London iGEM 2006</font></center>
<center>
<center>
-
 
+
<br>
{| style="width:100%; height:20px" border="1"
{| style="width:100%; height:20px" border="1"
|-  
|-  
-
! [[IGEM:IMPERIAL/2006/Calendar| Calendar]] !! [[IGEM:IMPERIAL/2006/LabCalendar| Lab Notebook]] !! [[IGEM:IMPERIAL/2006/project/parts| Testing]] !! [[IGEM:IMPERIAL/2006/project/parts/lab_status| Lab Status]] !! [[IGEM:IMPERIAL/2006/Photos|Photos]] !! [[IGEM:IMPERIAL/2006/Resources|Resources]]   
+
! [[IGEM:IMPERIAL/2006/Calendar| Calendar]] !! [[IGEM:IMPERIAL/2006/Before_the_Jamboree|To Do List]] !! [[IGEM:IMPERIAL/2006/Presentation| Presentation]] !! [[IGEM:IMPERIAL/2006/Contributions| Our Contributions]] !! [[IGEM:IMPERIAL/2006/Acknowledgments| Acknowledgments]] !! [[IGEM:IMPERIAL/2006/Resources|Resources]]   
|}
|}
{| class="wikitable" border="0" cellpadding="5" cellspacing="30" style="text-align:center"
{| class="wikitable" border="0" cellpadding="5" cellspacing="30" style="text-align:center"
!width="800" align="left" valign="top" style="background:#ADEAEA; color:black"|
!width="800" align="left" valign="top" style="background:#ADEAEA; color:black"|
 +
=='''[[IGEM:IMPERIAL/2006/The_Talk_Page|Project Discussion]]'''==
 +
==[[Image:Icon_board.png]] <font color="red"> <b>Breaking News</b></font color="red"> ==
==[[Image:Icon_board.png]] <font color="red"> <b>Breaking News</b></font color="red"> ==
-
<showhide>
 
-
===<u><font face="verdana">The prey cells are waiting to be attacked - (''14 Aug 2006'')</font></u>===
 
-
[[Image:PreyCellDigest.JPG|200px|right]]
 
-
After a series of challenging ligations, the first major breakthrough in the Wetlab has been achieved: The prey cells have been completed and their genetically engineered sequence has now been verified - with confirmation from gel electrophoresis and sequencing. <br>
 
-
Read more... __HIDER__
 
-
<hide>
+
>>>'''Major reorganisation of the WIKI underway''':
 +
*need to populate [[IGEM:IMPERIAL/2006/project/Oscillator/project_browser | part pages]] from existing documentation
 +
*need logos to present our projects: Oscillator, PoPs blocker, Biosensor
 +
*take care of [[IGEM:IMPERIAL/2006/Created_Pages | orphaned pages]] found
 +
>>>'''PRESENTATION''' during BioEng departmental seminar
 +
* October 25th, 16.30
 +
* room: 664, MechEng.
 +
===<u><font face="verdana">[[IGEM:IMPERIAL/2006/Breaking_News| News Archive]]</font></u>===
 +
|}
-
</hide>
 
-
</showhide>
 
-
 
-
 
-
'''Read About CRE-LOX [[Image:Redoing Cre2.doc]]'''
 
-
<showhide>
 
-
===<u><font face="verdana">A visit to Cambridge - iGEM teams from the UK meet to share their experience - (''26 July 2006'')</font></u>===
 
-
Read more... __HIDER__
 
-
<hide>
 
-
[[Image:UK_iGEM0074.JPG|300px|right]]
 
-
 
-
On a hot and sunny day, the I.CoLi team met early in the morning at King's Cross Station, London. You might wonder about the destination: CAMBRIDGE. <br>
 
-
On 24/25 July 2006, Cambridge University hosted the first UK iGEM meeting. The teams from Edinburgh and Imperial College visited Cambridge and all three iGEM teams exchanged their experience and ideas from the first weeks as well as taking part in a "mystery challenge" ... <br>
 
-
 
-
Shortly before lunch, the I.CoLi team met with the Cambridge team and after being shown through the Wetlabs at Cambridge, both teams had a picnic together outside. Instantly, everyone got caught up in talks and so time flew by until the arrival of the team from Edinburgh (whose train unfortunately broke down half-way during their journey). <br>
 
-
To get to know more about the different projects each team was working on, presentations were given, followed by short discussions. It was very interesting to see that on the one hand, a common structure could be seen in all team's approaches to their particular idea but on the other hand, the ways of handling a problem or distribution of tasks/organization within a team could differ remarkably.
 
-
 
-
As a special highlight of the day, iGEM instructors prepared a "mystery challenge":
 
-
The task for this challenge was to build a boat in 60min. - the fastest boat crossing the river would win! After an hour of intensive work, 5 brilliant boats were ready to go! Despite the promising-looking designs none of the boats succeeded in crossing the river in the end. The best boat, however, went a significant distance along the river (against the currents!) but was never seen again.
 
-
 
-
The eventful day ended with a cheerful dinner in the city of Cambridge.
 
-
 
-
A big thanks to Cambridge for hosting the UK iGEM meeting and making it a memorable iGEM day!
 
-
 
-
==[[IGEM:IMPERIAL/2006/Calendar/2006-7-24|Pictures from UK iGEM meeting in Cambridge]]==
 
-
</hide>
 
-
</showhide>
 
-
 
-
<showhide>
 
-
===<u><font face="verdana">Innovative Ideas emerging in new field of Synthetic Biology - (''20 July 2006'')</font></u>===
 
-
Read more... 
 
-
__HIDER__
 
-
<hide>
 
-
 
-
[[Image:CIMG5754(2).JPG|180px|right]]
 
-
<font face="verdana" color="#404040"><font size="+1">A</font>FTER a week of brainstorming and research, the I.CoLi team suddenly appeared with promising ideas in building a new system from standard biological parts. Three main ideas cristallized among the group of young people, which are being pursued further:
 
-
#[[IGEM:IMPERIAL/2006/project/Oscillator|Oscillator]] (based on Predator Prey dynamics)
 
-
#[[IGEM:IMPERIAL/2006/project|BioClock]]
 
-
#[[IGEM:IMPERIAL/2006/project|BioCD]]
 
-
Special emphasis is being put on the first idea and the past days have been spent on modelling (see Fashion section), further development in the Wetlab (see Science section) and on assembling and designing new parts (see Fashion section).
 
-
 
-
Further our idea, the I.CoLi team presented their project at Cambridge University on 24 July 2006.  The presentation can be found [http://openwetware.org/images/4/42/IGEM_@_Imperial.ppt here].  A big thank you goes to the Cambridge iGEM team for hosting us!
 
-
 
-
</hide></showhide>
 
-
<br>
 
-
 
-
|}
 
{| class="wikitable" border="0" cellpadding="5" cellspacing="1" style="text-align:center"
{| class="wikitable" border="0" cellpadding="5" cellspacing="1" style="text-align:center"
!width="400" align="left" valign="top" style="background:#E6E8FA; color:black"|
!width="400" align="left" valign="top" style="background:#E6E8FA; color:black"|
Line 92: Line 49:
Just in case we finish our project early, we have a lot more things to work on, stage 2 and future developments...
Just in case we finish our project early, we have a lot more things to work on, stage 2 and future developments...
-
!width="400" align="left" valign="top" style="background:#CCCCFF; color:black"|
+
*'''[[IGEM:IMPERIAL/2006/project/primers|Primer design]]
 +
Info on the Primers'''
 +
 
 +
*'''[[IGEM:IMPERIAL/2006/Least Square Curve Fit| Least Square Curve Fit on Matlab with J37016 Extracted Parameters]]'''
 +
How to do the least square curve fit on Matlab
 +
 
 +
!width="400" align="left" valign="top" style="background:#FDF8FF; color:black"|
==[[Image:Icon_board.png]] Science==
==[[Image:Icon_board.png]] Science==
 +
 +
*'''[[IGEM:IMPERIAL/2006/Calendar| Calendar]]'''
 +
Find out more about our hectic work schedule and plans for the future
*'''[[IGEM:IMPERIAL/2006/LabCalendar| Lab Notebook]]'''
*'''[[IGEM:IMPERIAL/2006/LabCalendar| Lab Notebook]]'''
Line 100: Line 66:
Info about our current [[IGEM:IMPERIAL/2006/project/parts/lab_status| lab status]]
Info about our current [[IGEM:IMPERIAL/2006/project/parts/lab_status| lab status]]
-
 
-
*'''[[IGEM:IMPERIAL/2006/Calendar| Calendar]]'''
 
-
Find out more about our hectic work schedule and plans for the future
 
*'''[[IGEM:IMPERIAL/2006/project/parts|Testing]]'''
*'''[[IGEM:IMPERIAL/2006/project/parts|Testing]]'''
Documents outlining how we intend to test our constructs can be found here
Documents outlining how we intend to test our constructs can be found here
-
*'''[[IGEM:IMPERIAL/Protocols|Protocols]]'''
+
*'''[[IGEM:IMPERIAL/2006/Protocols|Protocols]]'''
List of our protocols
List of our protocols
 +
 +
*'''[[IGEM:IMPERIAL/2006/Ligation Page|Ligation Page]]'''
 +
Page containing all of the ligation details
 +
 +
*'''[[IGEM:IMPERIAL/Results|Results]]'''
 +
We have data...lots and lots of data...
 +
 +
 +
*'''[[IGEM:IMPERIAL/2006/project/sequencing|Sequencing]]
 +
|}
|}
{| class="wikitable" border="0" cellpadding="5" cellspacing="1" style="text-align:center"
{| class="wikitable" border="0" cellpadding="5" cellspacing="1" style="text-align:center"
Line 132: Line 105:
==[[Image:Icon_board.png]] Opinion/Editorial==
==[[Image:Icon_board.png]] Opinion/Editorial==
-
*'''Today's Mood Index: 10/10'''
+
*'''Today's Mood Index: 4/10'''
-
We loved the chance to spend extra time on iGEM at the weekend. It was groovy!
+
So much to do and so little time to do it in...
-
*Meeting the Cambridge and Edinburgh team was a great morale booster - it really fit the spirit of the iGEM competition...Cambridge was beautiful, and the people were great...
+
*'''[[IGEM:IMPERIAL/2006/The Talk Page|Project Discussion]]'''
-
 
+
Discuss issues with members of the team.
|}
|}
Line 153: Line 126:
*[[User:Baijiongjun|Jiongjun Bai]]
*[[User:Baijiongjun|Jiongjun Bai]]
*[[User:Johnsy|John Sy]]  
*[[User:Johnsy|John Sy]]  
-
*[http://openwetware.org/wiki/User:JohnChattaway '''John Chattaway''']]
+
*[[User:JohnChattaway|John Chattaway]]
*[[User:Jonny|Jonathan Wells]]
*[[User:Jonny|Jonathan Wells]]
*[[User:Tom|Tom Hinson]]
*[[User:Tom|Tom Hinson]]
Line 165: Line 138:
*[http://www3.imperial.ac.uk/people/p.freemont Prof. Paul Freemont]
*[http://www3.imperial.ac.uk/people/p.freemont Prof. Paul Freemont]
*[http://www3.imperial.ac.uk/people/d.mann Dr. David Mann]
*[http://www3.imperial.ac.uk/people/d.mann Dr. David Mann]
 +
*Kirsten Jensen
*[[User:Vincent|Vincent Rouilly]]  
*[[User:Vincent|Vincent Rouilly]]  
-
*[[User:chuehloo|Chueh-Loo Poh]]  
+
*[[User:chuehloo|Chueh-Loo Poh]]
 +
*[[User:SxE00|Matthieu Bultelle]]
</hide></showhide>
</hide></showhide>
Even more celebrities are involved in this exciting project. Find out more with the link above
Even more celebrities are involved in this exciting project. Find out more with the link above
-
!width="400" align="left" valign="top" style="background:#FEF0DB; color:black"|
+
<showhide>
 +
'''Acknowledgements'''__HIDER__
 +
<hide>
 +
Throughout the project, many people have helped us in various ways - we are very thankful for all their precious time & efforts spent to support iGEM at Imperial ! Special thanks to everyone on the [http://openwetware.org/wiki/IGEM:IMPERIAL/2006/Acknowledgments Acknowledgements Page].
 +
</hide></showhide>
 +
 
 +
!width="400" align="left" valign="top" style="background:#DBFEF8; color:black"|
==[[Image:Icon_board.png]] Weather==
==[[Image:Icon_board.png]] Weather==
Line 179: Line 160:
*Location of our visitors
*Location of our visitors
<html>
<html>
-
<a href="http://clustrmaps.com/counter/maps.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006" id="clustrMapsLink"><img src="http://clustrmaps.com/counter/index2.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006" border=1 alt="Locations of visitors to this page"onError="this.onError=null; this.src='http://www.meetomatic.com/images/clustrmaps-back-soon.jpg'; document.getElementById('clustrMapsLink').href='http://clustrmaps.com/'">
+
<a href="http://clustrmaps.com/counter/maps.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006&type=small&clusters=no&map=world" id="clustrMapsLink"><img src="http://clustrmaps.com/counter/index2.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006" border=1 alt="Locations of visitors to this page"onError="this.onError=null; this.src='http://www.meetomatic.com/images/clustrmaps-back-soon.jpg'; document.getElementById('clustrMapsLink').href='http://clustrmaps.com/'">
</a>
</a>
</html>
</html>
Line 189: Line 170:
==[[Image:Icon_board.png]] Arts & Entertainment==
==[[Image:Icon_board.png]] Arts & Entertainment==
-
[[Image:CIMG57352.JPG|thumb|400px|right|First day in the Wetlab]]
+
[[Image:IGEM GroupPhotos0015.JPG|thumb|400px|right|The Imperial College iGEM team and instructors on the terrace of the Biochemistry building]]
*'''[[IGEM:IMPERIAL/2006/Quotes|Inspirational Quotes]]'''
*'''[[IGEM:IMPERIAL/2006/Quotes|Inspirational Quotes]]'''
Celebrity Quotes and more...
Celebrity Quotes and more...
Line 195: Line 176:
Featuring only the latest fashion and celebrities around Imperial College
Featuring only the latest fashion and celebrities around Imperial College
*'''[[IGEM:IMPERIAL/2006/Logo| Logo Suggestions]]
*'''[[IGEM:IMPERIAL/2006/Logo| Logo Suggestions]]
 +
Initial proposals for our logo
 +
*'''[[IGEM:IMPERIAL/2006/Sandbox| Sandbox]]
|}
|}
</center>
</center>
<center>[[Image:Icigembanner.png]]</center>
<center>[[Image:Icigembanner.png]]</center>
 +
 +
==Imperial iGEM=={{Special:Recentchanges/b=IGEM:IMPERIAL/2006&limit=50}}
 +
 +
<html>
 +
<!-- Start of StatCounter Code -->
 +
<script type="text/javascript" language="javascript">
 +
var sc_project=1999441;
 +
var sc_invisible=1;
 +
var sc_partition=18;
 +
var sc_security="18996820";
 +
</script>
 +
 +
<script type="text/javascript" language="javascript" src="http://www.statcounter.com/counter/frames.js"></script><noscript><a href="http://www.statcounter.com/" target="_blank"><img  src="http://c19.statcounter.com/counter.php?sc_project=1999441&amp;java=0&amp;security=18996820&amp;invisible=1" alt="website statistics" border="0"></a> </noscript>
 +
<!-- End of StatCounter Code -->
 +
</html>

Current revision

the newsletter of Imperial College London iGEM 2006


Calendar To Do List Presentation Our Contributions Acknowledgments Resources

Project Discussion

Image:Icon_board.png Breaking News

>>>Major reorganisation of the WIKI underway:

  • need to populate part pages from existing documentation
  • need logos to present our projects: Oscillator, PoPs blocker, Biosensor
  • take care of orphaned pages found

>>>PRESENTATION during BioEng departmental seminar

  • October 25th, 16.30
  • room: 664, MechEng.

News Archive

Image:Icon_board.png Fashion

Here you can view our top models - featuring world-renowned LV (Lotka-Volterra not Louis Vuitton) Design

These are the results of creative moments - the detailed design of the oscillator

The details of implementation - the parts for final assembly, parts for testing and creation of new parts

Just in case we finish our project early, we have a lot more things to work on, stage 2 and future developments...

Info on the Primers

How to do the least square curve fit on Matlab

Image:Icon_board.png Science

Find out more about our hectic work schedule and plans for the future

Working in the Wetlab - all about our trials, successes and... failures

Info about our current lab status

Documents outlining how we intend to test our constructs can be found here

List of our protocols

Page containing all of the ligation details

We have data...lots and lots of data...


Image:Icon_board.png Education

References to helpful and inspiring papers

Meetings in the journal clubs - papers and presentations

Everything you should really know when to tackle a problem in Synthetic Biology - Expand your knowledge about engineering concepts and biological systems when browsing through our collection of lecture notes

Essential links for iGEM 2006


Image:Icon_board.png Opinion/Editorial

  • Today's Mood Index: 4/10

So much to do and so little time to do it in...


Discuss issues with members of the team.

Image:Icon_board.png Celebrity Profile

<showhide> The Undergrads __HIDER__ <hide>

</hide></showhide> <showhide> Do you want to get to know the celebrities working on this project? Click the link above to learn more about all the members of I.CoLi 2006 (Imperial College London iGEM 2006)

The Advisors__HIDER__ <hide>

</hide></showhide> Even more celebrities are involved in this exciting project. Find out more with the link above

<showhide> Acknowledgements__HIDER__ <hide> Throughout the project, many people have helped us in various ways - we are very thankful for all their precious time & efforts spent to support iGEM at Imperial ! Special thanks to everyone on the Acknowledgements Page. </hide></showhide>

Image:Icon_board.png Weather

A summary of our highs and lows ... the brainstorming sessions and their outcomes

  • Location of our visitors

Locations of visitors to this page


Image:Icon_board.png Arts & Entertainment

The Imperial College iGEM team and instructors on the terrace of the Biochemistry building
The Imperial College iGEM team and instructors on the terrace of the Biochemistry building

Celebrity Quotes and more...

Featuring only the latest fashion and celebrities around Imperial College

Initial proposals for our logo

  • Sandbox
Image:Icigembanner.png

Imperial iGEM


Personal tools