IGEM:IMPERIAL/2006/project/Oscillator/Modelling: Difference between revisions

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{{IGEM:IMPERIAL/2006/Modelling}}
{{IGEM:IMPERIAL/2006/Modelling}}


==Lotka-Volterra Modelling==


First, we considered the Lotka-Volterra model and it's consequences before actually modelling our system because of the similarities.
These pages are designed as a guide to modelling the oscillator.
The different tabs designate different sections in the modelling and separate various types of models from each other.
<br>
The following models can be found:
:1.  Pure Lotka-Volterra Modelling
:2.  Modelling of all test contructs/components of the oscillator
<showhide>
::  Full Document on test construct modelling & General derivation available here: __HIDER__
<hide>
::'''Modelling The Test Constructs'''


*Click [[Image:Oscillationmodelv2.xml]] to access the SBML file which we used to simulate the Lotka-Volterra model on CellDesigner 3.2.
::*Finally - the long awaited document for the [http://openwetware.org/images/d/d8/ModellingOurOverallSystem2.pdf test construct modelling 1 (pdf)].
::*The extended version of the [http://openwetware.org/images/f/f4/ModellingOurOverallSystem3.pdf test construct modelling 2 (pdf)]
::[[Image:Slide2.PNG|700px]]
</hide>
</showhide>


*[[IGEM:IMPERIAL/2006/project/Oscillator/Modelling/Realistic Values|Realistic Values]] to be used in descriptive models.
:3. Overall system model
 
*[[IGEM:IMPERIAL/2006/project/Oscillator/Modelling/Analysis|Analysis]] of LV model
 
*[http://openwetware.org/images/2/25/WIKI_Document_Number_5_-_Curve_Fitting.doc Document] on how to effectively extract parameters from Michaelis Menton model, by Matthieu Bultelle
 
==Modelling The Test Constructs==
 
Finally - the long awaited document for the [http://openwetware.org/images/d/d8/ModellingOurOverallSystem2.pdf test construct modelling (pdf)].
 
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Latest revision as of 04:30, 24 September 2006

MODELLING THE OSCILLATOR AND ITS COMPONENTS:



These pages are designed as a guide to modelling the oscillator. The different tabs designate different sections in the modelling and separate various types of models from each other.
The following models can be found:

1. Pure Lotka-Volterra Modelling
2. Modelling of all test contructs/components of the oscillator

<showhide>

Full Document on test construct modelling & General derivation available here: __HIDER__

<hide>

Modelling The Test Constructs

</hide> </showhide>

3. Overall system model
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