IGEM:IMPERIAL/2006/project/Oscillator/project browser/Full System: Difference between revisions

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System level specifications
 
'''System level specifications'''
 
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! style="background:lightgrey" width="100pt" |Properties !! Comments
! style="background:lightgrey" width="100pt" |Properties !! Comments
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| Flexibility ||Amplitude and frequency should be controllable||
| Flexibility ||Amplitude and frequency should be controllable||
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| Connectivity ||The oscillator should be able to be connected to other systems
| Connectivity ||The oscillator should be able to be integrated into other systems
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==Open issues==
==Open issues==
*list known issues
*list known issues

Revision as of 19:36, 28 October 2006

Super Parts This is the whole system
Actual Part
Sub Parts Prey Construct Predator Construct


Motivations

  • Oscillators are already a fundamental building block in traditional engineering applications
  • We wish to build a synthetic biological oscillator that can become a fundamental building block in future synthetic biological applications
  • Previous oscillators have been attempted (such as the Repressilator by Elowitz and Leibler in 2000) but they all generally shared the following problems:
  • Noise
  • Instability
  • Inflexible (i.e. lack of control over amplitude and frequency)
  • Based on these past limitations, we determined the specifications for our oscillator:
  • The oscillations should remain stable for greater than 10 cycles
  • It should have a high signal to noise ratio
  • It should be flexible (we should be able to control amplitude and frequency)
  • It should have connectivity (should be able to be integrated into another system)

Part interface

(describe your black-box approach, define properties of inputs/outputs)

INPUTS OUTPUTS
Prey molecule Prey molecule

(don't forget to insert a relevant image of your black box.)

Expected behavior and performances

System level specifications
Properties Comments
Range ?
Expected output



Latency ?
Robustness Oscillations should be stable for greater then 10 cycles
Variability There should be a high signal to noise ratio
Flexibility Amplitude and frequency should be controllable
Connectivity The oscillator should be able to be integrated into other systems

Open issues

  • list known issues