IGEM:IMPERIAL/2007/Projects/Biofilm Detector/References

From OpenWetWare

< IGEM:IMPERIAL | 2007 | Projects | Biofilm Detector(Difference between revisions)
Jump to: navigation, search
m (→Urinary Catheter Specific)
Current revision (06:06, 17 October 2007) (view source)
m
 
Line 105: Line 105:
* [http://www.hps.scot.nhs.uk/haiic/sshaip/cautisurveillance.aspx NHS program on CAUTI]
* [http://www.hps.scot.nhs.uk/haiic/sshaip/cautisurveillance.aspx NHS program on CAUTI]
<biblio>
<biblio>
-
#urinary-catheter pmid=9726901
+
#urinary-catheter1 pmid=9726901
-
#urinary-catheter pmid=16850636
+
#urinary-catheter2 pmid=16850636
-
#urinary-catheter pmid=10654364
+
#urinary-catheter3 pmid=10654364
-
#urinary-catheter pmid=17230395
+
#urinary-catheter4 pmid=17230395
-
#urinary-catheter pmid=16843240
+
#urinary-catheter5 pmid=16843240
-
#urinary-catheter pmid=17045784
+
#urinary-catheter6 pmid=17045784
-
#urinary-catheter pmid=3333661
+
#urinary-catheter7 pmid=3333661
-
#urinary-catheter pmid=15153930
+
#urinary-catheter8 pmid=15153930
-
#urinary-catheter pmid=16597888
+
#urinary-catheter9 pmid=16597888
-
#urinary-catheter pmid=16060714
+
#urinary-catheter10 pmid=16060714
-
#urinary-catheter pmid=15923986
+
#urinary-catheter11 pmid=15923986
-
#urinary-catheter pmid=15867530
+
#urinary-catheter12 pmid=15867530
-
#urinary-catheter pmid=15647698
+
#urinary-catheter13 pmid=15647698
-
#urinary-catheter pmid=12848477
+
#urinary-catheter14 pmid=12848477
</biblio>
</biblio>
Line 124: Line 124:
<biblio>
<biblio>
-
#biofilm pmid=17046102
+
#biofilm1 pmid=17046102
-
#biofilm pmid=3333661
+
#biofilm2 pmid=3333661
-
#biofilm pmid=17534791
+
#biofilm3 pmid=17534791
-
#biofilm pmid=12194761
+
#biofilm4 pmid=12194761
-
#biofilm pmid=11565080
+
#biofilm5 pmid=11565080
-
#biofilm pmid=16402262
+
#biofilm6 pmid=16402262
-
#biofilm pmid=15037330
+
#biofilm7 pmid=15037330
-
#biofilm pmid=11294737
+
#biofilm8 pmid=11294737
-
#biofilm pmid=15647698
+
#biofilm9 pmid=15647698
</biblio>
</biblio>

Current revision

Infector Detector: References



Contents


Publications

  • Introductions and reviews
  1. Costerton JW, Lewandowski Z, DeBeer D, Caldwell D, Korber D, and James G. . pmid:8157581. PubMed HubMed [Microniche]
  2. Jackson DW, Suzuki K, Oakford L, Simecka JW, Hart ME, and Romeo T. . pmid:11741870. PubMed HubMed [Dispersal]
  3. Lu TK and Collins JJ. . pmid:17592147. PubMed HubMed [Phage]
All Medline abstracts: PubMed HubMed


Heterogeneity of phenotypes

  1. Xu KD, Stewart PS, Xia F, Huang CT, and McFeters GA. . pmid:9758837. PubMed HubMed [Spatial]
  2. MacLeod FA, Guiot SR, and Costerton JW. . pmid:2383005. PubMed HubMed [Layered]
  3. Sternberg C, Christensen BB, Johansen T, Toftgaard Nielsen A, Andersen JB, Givskov M, and Molin S. . pmid:10473423. PubMed HubMed [Distribution]
All Medline abstracts: PubMed HubMed


Experimental techniques

  1. Harmsen HJ, Kengen HM, Akkermans AD, Stams AJ, and de Vos WM. . pmid:8633864. PubMed HubMed [Hybridisation]


Diffusion and flow in biofilms

  1. Stewart PS. . pmid:10099336. PubMed HubMed [Review]
  2. Stoodley P, Debeer D, and Lewandowski Z. . pmid:16349345. PubMed HubMed [Flow]
  3. Wood BD, Quintard M, and Whitaker S. . pmid:11788949. PubMed HubMed [Calculation]
  4. Nilsson P, Olofsson A, Fagerlind M, Fagerström T, Rice S, Kjelleberg S, and Steinberg P. . pmid:11397086. PubMed HubMed [AHL]
All Medline abstracts: PubMed HubMed


[Biofilm Mechanics]

Modelling biofilms

  1. Picioreanu C, van Loosdrecht MC, and Heijnen JJ. . pmid:10099266. PubMed HubMed [Hybrid]
  2. Kreft JU, Picioreanu C, Wimpenny JW, and van Loosdrecht MC. . pmid:11700341. PubMed HubMed [Individual]
  3. Hermanowicz SW. . pmid:11137525. PubMed HubMed [2D]
  4. Dockery JD and Keener JP. . pmid:11146885. PubMed HubMed [Quorum]
  5. Nilsson P, Olofsson A, Fagerlind M, Fagerström T, Rice S, Kjelleberg S, and Steinberg P. . pmid:11397086. PubMed HubMed [Diffusion]
All Medline abstracts: PubMed HubMed


  1. Programmed Population control by Cell-Cell Communication and Regulated Killing

Cell signalling

  1. Redfield RJ. . pmid:12160634. PubMed HubMed [Quorum]
  2. Davies DG, Parsek MR, Pearson JP, Iglewski BH, Costerton JW, and Greenberg EP. . pmid:9535661. PubMed HubMed [Development]
  3. O'Toole GA, Gibbs KA, Hager PW, Phibbs PV Jr, and Kolter R. . pmid:10629189. PubMed HubMed [Crc]
All Medline abstracts: PubMed HubMed


Gene expression

  1. Whiteley M, Bangera MG, Bumgarner RE, Parsek MR, Teitzel GM, Lory S, and Greenberg EP. . pmid:11677611. PubMed HubMed [GeneExp]
  2. Xu KD, Franklin MJ, Park CH, McFeters GA, and Stewart PS. . pmid:11356569. PubMed HubMed [RpoS]
All Medline abstracts: PubMed HubMed


MRSA Specific

  1. Manago K, Nishi J, Wakimoto N, Miyanohara H, Sarantuya J, Tokuda K, Iwashita M, Yamamoto K, Yoshinaga M, Maruyama I, and Kawano Y. . pmid:16465637. PubMed HubMed [agr]
  2. Vuong C, Saenz HL, Götz F, and Otto M. . pmid:11069241. PubMed HubMed [MRSA-agr]
  3. Grinholc M, Wegrzyn G, and Kurlenda J. . pmid:17537178. PubMed HubMed [ica]
  4. Cramton SE, Gerke C, Schnell NF, Nichols WW, and Götz F. . pmid:10496925. PubMed HubMed [ica2]
  5. Martín-López JV, Pérez-Roth E, Claverie-Martín F, Díez Gil O, Batista N, Morales M, and Méndez-Alvarez S. . pmid:11923401. PubMed HubMed [detection]
  6. McKenney D, Hübner J, Muller E, Wang Y, Goldmann DA, and Pier GB. . pmid:9746568. PubMed HubMed [icalocus]
  7. Ziebuhr W, Heilmann C, Götz F, Meyer P, Wilms K, Straube E, and Hacker J. . pmid:9038293. PubMed HubMed [icadetection]
  8. O'Gara JP. . pmid:17419768. PubMed HubMed [icareg]
  9. Country Doctor [CountryDoctor]
  10. Shitrit P, Gottesman BS, Katzir M, Kilman A, Ben-Nissan Y, and Chowers M. . pmid:17006805. PubMed HubMed [Surv]
  11. [1] [amoeba]
All Medline abstracts: PubMed HubMed


Biofilms in the Medical Environment

  • keywords: biofilm, catheter, infection, urinary
  • [1] biofilm on catheters]

Urinary Catheter Specific

  1. Stickler DJ, Morris NS, McLean RJ, and Fuqua C. . pmid:9726901. PubMed HubMed [urinary-catheter1]
  2. Danchaivijitr S, Dhiraputra C, Cherdrungsi R, Jintanothaitavorn D, and Srihapol N. . pmid:16850636. PubMed HubMed [urinary-catheter2]
  3. Morris NS, Stickler DJ, and McLean RJ. . pmid:10654364. PubMed HubMed [urinary-catheter3]
  4. Trautner BW, Hull RA, Thornby JI, and Darouiche RO. . pmid:17230395. PubMed HubMed [urinary-catheter4]
  5. Drinka PJ. . pmid:16843240. PubMed HubMed [urinary-catheter5]
  6. Ha US and Cho YH. . pmid:17045784. PubMed HubMed [urinary-catheter6]
  7. Warren JW. . pmid:3333661. PubMed HubMed [urinary-catheter7]
  8. Trautner BW and Darouiche RO. . pmid:15153930. PubMed HubMed [urinary-catheter8]
  9. Stickler DJ, Jones SM, Adusei GO, and Waters MG. . pmid:16597888. PubMed HubMed [urinary-catheter9]
  10. Nicolle LE. . pmid:16060714. PubMed HubMed [urinary-catheter10]
  11. Godfrey H and Fraczyk L. . pmid:15923986. PubMed HubMed [urinary-catheter11]
  12. Toughill E. . pmid:15867530. PubMed HubMed [urinary-catheter12]
  13. Trautner BW, Hull RA, and Darouiche RO. . pmid:15647698. PubMed HubMed [urinary-catheter13]
  14. Saint S and Chenoweth CE. . pmid:12848477. PubMed HubMed [urinary-catheter14]
All Medline abstracts: PubMed HubMed

General

  1. Lindsay D and von Holy A. . pmid:17046102. PubMed HubMed [biofilm1]
  2. Warren JW. . pmid:3333661. PubMed HubMed [biofilm2]
  3. Percival SL and Kite P. . pmid:17534791. PubMed HubMed [biofilm3]
  4. Donlan RM. . pmid:12194761. PubMed HubMed [biofilm4]
  5. Donlan RM. . pmid:11565080. PubMed HubMed [biofilm5]
  6. Tenke P, Kovacs B, Jäckel M, and Nagy E. . pmid:16402262. PubMed HubMed [biofilm6]
  7. Tenke P, Riedl CR, Jones GL, Williams GJ, Stickler D, and Nagy E. . pmid:15037330. PubMed HubMed [biofilm7]
  8. Maki DG and Tambyah PA. . pmid:11294737. PubMed HubMed [biofilm8]
  9. Trautner BW, Hull RA, and Darouiche RO. . pmid:15647698. PubMed HubMed [biofilm9]
All Medline abstracts: PubMed HubMed

Biofilm detection using LuxR/pluxI system

http://aem.asm.org/cgi/reprint/67/2/575

Growth of E.coli biofilms in controlled environments

http://inls.ucsd.edu/~volfson/biofilm/

Developmental pathway for biofilm formation in curli-producing Escherichia coli strains: role of flagella, curli and colanic acid. Combaret et al.

http://www.springerlink.com/content/jh442x351242n044/fulltext.pdf

AHL concentration in biofilms

http://www.blackwell-synergy.com/doi/abs/10.1046/j.1462-2920.2000.00136.x

Resources

Imperial College contacts:


Web pages:

Retrieved from "http://www.openwetware.org/wiki/IGEM:IMPERIAL/2007/Projects/Biofilm_Detector/References"
Personal tools