IGEM:IMPERIAL/2008/New/Growth Curve
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In order to model the growth of ''B. subtilis'', the process was broken down into three main steps, where a separate submodel is produced in MATLAB for each step. Each submodel is an ODE model, which can be simulated using MATLAB. The variables in each submodel can be adjusted according to the boundary conditions (from experimental results).  In order to model the growth of ''B. subtilis'', the process was broken down into three main steps, where a separate submodel is produced in MATLAB for each step. Each submodel is an ODE model, which can be simulated using MATLAB. The variables in each submodel can be adjusted according to the boundary conditions (from experimental results).  
  In the final step, a combination of Submodels 1 and 2 are superposed with Submodel 3, resulting in a more complex model which enhances the accuracy of illustrating bacterial growth. For more details about the submodels, please click on the following link: [[Media:Modelling_Growth_Curve.pdf]]. For more information on our modelling strategy, please click on [[Tutorial for Growth Curve]].  +  In the final step, a combination of Submodels 1 and 2 are superposed with Submodel 3, resulting in a more complex model which enhances the accuracy of illustrating bacterial growth. For more details about the submodels, please click on the following link: [[Media:Modelling_Growth_Curve.pdf]]. For more information on our modelling strategy, please click on the following: [[Tutorial for Growth Curve]]. 
==The Model==  ==The Model== 
Revision as of 05:43, 30 September 2008
 
ResultsThe model for the growth curve was fitted to the experimental results as shown below. The experimental results is depicted by the red curve, while our model is shown by the green curve. The resource curve was also plotted as a function of time and is shown below. Based on our experimental results from the Wet Lab, a log graph was plotted to determine the growth rate. The growth rate was then determined from the gradient of the log graph. This value was included when simulating the growth model using MATLAB.
GROWTH CONSTANT: A = 1.3494 INITIAL NUTRIENT CONCENTRATION: R_0 = 2 HILL COEFFICIENT: n = 1.25 INITIAL OD = 0.4 CONSTANT: α = 0.64516
