IGEM:Imperial/2010: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
No edit summary
No edit summary
Line 1: Line 1:
<div id="mainpage">
{{Imperial2010/Header}}
[[Image:Imperialigemheaderone.jpg|900px]]
{| cellspacing="0"
{| cellspacing="5"
|width="180px" class="blue" |
<!-- RESOURCES HEADER with edit link-->
<h3>Project</h3>
<hr/>
<!-- END RESOURCES HEADER-->
 
===Modules===
* [[IGEM:Imperial/2010/Detection_module | Detection module]]
* [[IGEM:Imperial/2010/Fast_Response_module | Fast Response module]]
* [[IGEM:Imperial/2010/Output_module | Output module]]
* [[IGEM:Imperial/2010/Ethics | Ethical issues]]
* [[IGEM:Imperial/2010/Parts | Parts]]
* [[IGEM:Imperial/2010/Papers | Papers]]
 
===Drylab===
* [[IGEM:Imperial/2010/Modelling | Modelling]]
 
===Temp===
* [[IGEM:Imperial/2010/Parts/Synthesis | Synthesis]]
* [[IGEM:Imperial/2010/Strategy | Strategy]]
 
===Wetlab===
* [[IGEM:Imperial/2010/Lab_Work | Lab Work]]
* [[IGEM:Imperial/2010/Protocol | Protocol]]
 
===Extras===
* [[IGEM:Imperial/2010/Projects | Initial Brainstorming]]
* [[IGEM:Imperial/2010/Journal_Club | Journal Club]]
* [[IGEM:Imperial/2010/Movie_Night | Movie Night]]
* [[IGEM:Imperial/2010/Judging_Criteria | Judging Criteria]]
 
===Links===
* [http://www.subtiwiki.uni-goettingen.de/wiki/index.php/Main_Page SubtiWiki]
* [http://www.nmr2.buffalo.edu/nesg.wiki/Main_Page Structural Bio Wiki]
* [http://www.rcsb.org/pdb/home/home.do Protein Data Bank w/ reference papers]
 
<!-- PEOPLE HEADER with edit link-->
<h3><html>
<img src="http://openwetware.org/images/3/39/Icon_groups.png" alt="People">
</html>People</h3>
<hr/>
<!-- END PEOPLE HEADER with edit link-->
 
<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>Imperial iGEM 2010</title>
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.2/jquery.min.js"></script>
<script type="text/javascript">
  $(document).ready(function(){
  $("ul[id|=poplist]").hide();
 
$("p[id|=popshow]").click(function() {
      $("ul[id|=poplist]").slideToggle("slow");
      return false;
      });
 
 
  });
</script>
<style type="text/css">
  #popcon
  {
  width: 180px;
  }
 
  #popcon ul
  {
  margin-left: 0px;
  padding-left: 0px;
  list-style: none;
  font-family: Arial, Helvetica, sans-serif;
  }
 
  #popshow
  {
  width: 180px;
  margin-left: 0px;
  padding-left: 0px;
  list-style: none;
  font-family: Arial, Helvetica, sans-serif;
  display: block;
  color: #fff;
  text-decoration: none;
  text-align: center;
  background-color: #34487B;
  padding: 3px;
  border-bottom: 1px solid #fff;
  }
 
  #popcon a:link, #popcon a:visited
  {
  display: block;
  color: #fff;
  text-decoration: none;
  text-align: center;
  background-color: #34487B;
  padding: 3px;
  //border-bottom: 1px solid #fff;
  }
 
  #popcon a:hover, #popcon a:active
  {
  background-color: #6E8BB5
  }
</style>
</head>
<body>
<p id="popshow">Students (Click me)</p>
<div id="popcon">
  <ul id="poplist">
  <li><a href="http://openwetware.org/wiki/User:Piotr_D._Faba" class="popt">Piotr D Faba</a></li>
  <li><a href="http://openwetware.org/wiki/User:Harriet_D._Gliddon" class="popt">Harriet D Gliddon</a></li>
  <li><a href="http://openwetware.org/wiki/User:Nicolas_Kylilis" class="popt">Nicolas Kylilis</a></li>
  <li><a href="http://openwetware.org/wiki/User:Benjamin_Miller" class="popt">Benjamin Miller</a></li>
  <li><a href="http://openwetware.org/wiki/User:Anita_Nguyen" class="popt">Anita Nguyen</a></li>
  <li><a href="http://openwetware.org/wiki/User:Wolfgang_Pernice" class="popt">Wolfgang Pernice</a></li>
  <li><a href="http://openwetware.org/wiki/User:Kyasha_Sri_Ranjan" class="popt">Kyasha Sri Ranjan</a></li>
  <li><a href="http://openwetware.org/wiki/User:Madeline_Rounds" class="popt">Madeline Rounds</a></li>
  <li><a href="http://openwetware.org/wiki/User:A._Florian_Sessler" class="popt">A Florian Sessler</a></li>
  <li><a href="http://openwetware.org/wiki/User:Kirill_Shkura" class="popt">Kirill Shkura</a></li>
<li><a href="http://openwetware.org/wiki/User:Team_Gallery" class="popt">Team Gallery</a></li>
  </ul>
</div>
</body>
</html>
 
'''Advisors'''
* [[User:Chris_D_Hirst | Chris D Hirst]]
* Kirsten Jensen
* [[Tom_Ellis | Tom Ellis]]
* [http://www.bg.ic.ac.uk/research/g.stan Guy-Bart Stan]
 
|width="600px" class="white" |
|width="600px" class="white" |
<!-- INFORMATION HEADER with edit link-->
“More than two billion people around the world live with unrelenting
<h3>Project description</h3>
illness due to parasites” - WHO Director General Lee Jong-wook.
<!-- END INFORMATION HEADER with edit link-->
Synthetic biology offers great opportunity for biosensors, however
----
current designs require hours before useful output. To tackle this
 
issue in the field, it's crucial that our project can respond in
Many biological systems are generally very slow. Most rely on transcription-based platforms which can take from several hours to a week to produce a detectable response. Our concept is an adaptable, modular and robust fast response system, which is fundamental for modern applications in synthetic biology.  
minutes, hence we have engineered a fast, modular sensor framework.
{| class="wikitable" style="text-align: center; width: 20%; height: 170px;"
This allows detection of a range of different parasites, and may also
  | [[Image:Detection module.JPG|thumb|center|200px]]
be used as an environmental tool for mapping their spread. We have
  | [[Image:Fast response module.JPG|thumb|center|200px]]
developed two new technologies that enable our modular input/output -
  | [[Image:Output module.JPG|thumb|center|200px]]
a novel cell surface biosensor, customisable for specific parasitic
 
proteases, linked through quorum-sensing to a new 'fast-response'
module capable of producing a detectable output in minutes. To
demonstrate the concept, we've designed and fabricated B. subtilis to
give a striking colour readout upon detecting the waterborne
Schistosoma parasite which affects 200 million people worldwide.
|}
|}
<h3>Recent Updates</h3>
----
{{Special:RecentChanges/IGEM:Imperial&limit=15}}
<LNCalendar></LNCalendar>
|}
</div>


__NOEDITSECTION__
__NOEDITSECTION__

Revision as of 09:09, 23 September 2010

<html>

<head>
 <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
 <script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.2/jquery.min.js"></script>
 <script type="text/javascript">
  $(document).ready(function(){

$(function(){

var path = location.pathname.substring(1);
if ( path )
$('#headover ul li a[href$="' + path + '"]').addClass("curlink").css("color","#ea8828");;
var vCurlink = $('#headover ul li a[href$="' + path + '"]').attr("id");
$('#'+vCurlink+'.listhead').addClass('curlink').css("color","#444444");

});

$('#menuback').mouseover(function() {

$('#headover').stop().animate({height:'150px',top:'0px'},1000);

});

$('#menu').mouseleave(function() {

$('.listhead').not('.curlink').css("color","#ffffff");
$('.listmain').not('.curlink').css("color","#dddddd");
$('#headover ul').fadeOut(200);
$('#headover').stop().animate({height:'50px',top:'100px'},1000);

});

$('.listhead').mouseover(function(){

$('.listhead').not('.curlink').css("color","#ffffff");
$(this).css("color","#444444");
$('#headover ul').css("display","none");
var vActive = $(this).attr("id");
$('.'+vActive).stop().fadeIn(200);

});

$('.listmain').mouseover(function(){

$('.listmain').not('.curlink').css("color","#dddddd");
$(this).css("color","#ea8828");

});

$('#headover').mouseleave(function(){

$('.listmain').not('.curlink').css("color","#dddddd");

});

  });
 </script>
 <style type="text/css">
  .firstHeading {
   display: none;}
  #content {
   width: 900px;
   font-family: helvetica, arial, sans-serif;
   color: #555555}
  #title {
   width:900px;
   height:50px;
   position: relative;
   top: 0px;
   left: 0px;}
  #implogo {
   width:190px;
   height:50px;
   position: absolute;
   top: 0px;
   left: 20px;
   background-image:url(http://openwetware.org/images/c/c9/Imperialigemimplogo.jpg);}
  #igemlogo {
   width:84px;
   height:50px;
   position:absolute;
   top:0px;
   left:260px;
   background-image:url(http://openwetware.org/images/9/9c/Imperialigemigemlogo.jpg);}
  #csynbilogo {
   width:205px;
   height:50px;
   position:absolute;
   top:0px;
   left:394px;
   background-image:url(http://openwetware.org/images/a/ac/Imperialigemcsynbilogo.jpg);}
  #menu {
   width:900px;
   height:150px;
   position: relative;
   top: 20px;
   left: 0px;}
  #menuback {
   width:100px;
   height:150px;
   position: absolute;
   top: 0px;
   left: 0px;
   background-color: #ea8828}
  #headpic {
   width:800px;
   height:150px;
   position: absolute;
   top: 0px;
   left: 100px;
   background-image: url('http://openwetware.org/images/5/54/Imperialigemheadone.jpg'); }
  #headover {
   width: 800px;
   height:50px;
   position: absolute;
   top: 100px;
   left: 0px;
   background: url(http://openwetware.org/images/d/d8/Imperialigemheadoverone.png) 0px 0px no-repeat; }
  a {
   outline:none;}
  #headtit{
   font-family: helvetica, arial, sans-serif;
   font-size: 1.2em;
   color: #ffffff;
   position: absolute;
   top: 0.5em;
   right: 1.4em;}
  .dark{
   color: #dddddd;}
  .highlight{
   color: #ea8828;}
  #menulist{
   position: absolute;
   top: 16px;
   left: 3px;
   list-style: none;}
  #menulist li{
   height: 30px;
   }
  #menulist li a{
   font-weight: 100;
   font-size: 1.2em;
   text-decoration: none;
   font-family: helvetica, arial, sans-serif;
   color: #ffffff;}
  #headover ul{
   list-style: none;
   display: none;
   position: absolute;
   top: 1.2em;
   left: 0.2em;
   }
  #headover ul ul{
   position: absolute;
   top:-0.2em;
   left: 15em;}
  #headover ul li{
   height: 2.4em;
   }
  #headover ul li a{
   font-weight: 100;
   font-size: 1.2em;
   text-decoration: none;
   font-family: helvetica, arial, sans-serif;
   color: #dddddd;}
 </style>
</head>
<body>
 <div id='title'>
  <div id='implogo'>
  </div>
  <div id='igemlogo'>
  </div>
  <div id='csynbilogo'>
  </div>
 </div>
 <div id='menu'>
  <div id='menuback'>
   <ul id='menulist'>
    <li><a href='#' class='listhead' id='project'>Project</a></li>
    <li><a href='#' class='listhead' id='plan'>Plan</a></li>
    <li><a href='#' class='listhead' id='results'>Results</a></li>
    <li><a href='#' class='listhead' id='extra'>Extra</a></li>
   </ul>
  </div>
  <div id='headpic'>
   <div id='headover'>
    <p id='headtit'>Parasight<span class='dark'> &nbsp;<span class='highlight'>|</span>&nbsp;&nbsp;Parasite detection with a rapid response</span></p>
    <ul class='project'>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010' class='listmain' id='project'>Overview</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Detection_module' class='listmain' id='project'>Detection Module</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Fast_Response_module' class='listmain' id='project'>Fast Response Module</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Output_module' class='listmain' id='project'>Output Module</a></li>
     <ul class='project'>
      <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Ethics' class='listmain' id='project'>Ethics</a></li>
      <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Parts' class='listmain' id='project'>Parts</a></li>
      <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Papers' class='listmain' id='project'>Papers</a></li>
     </ul>
    </ul>
    <ul class='plan'>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Strategy' class='listmain' id='plan'>Strategy</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Parts/Synthesis' class='listmain' id='plan'>Synthesis</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Lab_Work' class='listmain' id='plan'>Lab Work</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Protocol' class='listmain' id='plan'>Protocol</a></li>
     <ul class='plan'>
      <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Modelling' class='listmain' id='plan'>Modelling</a></li>
     </ul>
    </ul>
    <ul class='results'>
     <li><a href='#' class='listmain' id='results'>Under Construction</a></li>
    </ul> 
    <ul class='extra'>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Projects' class='listmain' id='extra'>Brainstorming</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Journal_Club' class='listmain' id='extra'>Journal Club</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Movie_Night' class='listmain' id='extra'>Movie Night</a></li>
     <li><a href='http://openwetware.org/wiki/IGEM:Imperial/2010/Judging_Criteria' class='listmain' id='extra'>Judging Criteria</a></li>
    </ul> 
   </div>
  </div>
 </div>
</body>

</html> <html>

<head>
 <style type="text/css">
  #blank {
   height:40px;
   width: 900px;
 </style>
</head>
<body>
 <div id="blank">
 </div>
</body>

</html>

“More than two billion people around the world live with unrelenting illness due to parasites” - WHO Director General Lee Jong-wook. Synthetic biology offers great opportunity for biosensors, however current designs require hours before useful output. To tackle this issue in the field, it's crucial that our project can respond in minutes, hence we have engineered a fast, modular sensor framework. This allows detection of a range of different parasites, and may also be used as an environmental tool for mapping their spread. We have developed two new technologies that enable our modular input/output - a novel cell surface biosensor, customisable for specific parasitic proteases, linked through quorum-sensing to a new 'fast-response' module capable of producing a detectable output in minutes. To demonstrate the concept, we've designed and fabricated B. subtilis to give a striking colour readout upon detecting the waterborne Schistosoma parasite which affects 200 million people worldwide.



<html> <!-- Start of StatCounter Code --> <script type="text/javascript" language="javascript"> var sc_project=2128467; var sc_invisible=1; var sc_partition=19; var sc_security="0b7ca9e0"; </script>

<script type="text/javascript" language="javascript" src="http://www.statcounter.com/counter/frames.js"></script><noscript><a href="http://www.statcounter.com/" target="_blank"><img src="http://c20.statcounter.com/counter.php?sc_project=2128467&amp;java=0&amp;security=0b7ca9e0&amp;invisible=1" alt="web tracker" border="0"></a> </noscript> <!-- End of StatCounter Code --> </html>