IGEM:MIT/2006/Notebook/2006-8-2: Difference between revisions

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==to do==
==to do==
#(am) analyze 42 sequence results using prepared contigs in VectorNTI -'''done. unfortunately our analysis shows that nothing seems to have inserted. Perhaps digests are not being run long enough? also, pchBA mutagenesis was unsuccessful.
#analyze 42 sequence results using prepared contigs in VectorNTI -'''done. unfortunately our analysis shows that nothing seems to have inserted. Perhaps digests are not being run long enough? also, pchBA mutagenesis was unsuccessful.
#start isoamyl alcohol generating device work
#start isoamyl alcohol generating device work
#*PCRing again to get higher DNA concentrations for digesting/ligating on 8/3
#*PCR BAT2 and THI3 again to get higher DNA concentrations for digesting/ligating on 8/3
#team meeting to discuss topics for meeting
#(3 pm) meeting with advisors
#(3 pm) meeting with advisors
#(pm) make liquid cultures A,B,C from each potentially useful transformant plate:
#run gel of PCR products/PCR cleanup and nanodrop
#make liquid cultures A,B,C from each potentially useful transformant plate:


==meeting topics==
==meeting topics==

Revision as of 10:06, 2 August 2006

to do

  1. analyze 42 sequence results using prepared contigs in VectorNTI -done. unfortunately our analysis shows that nothing seems to have inserted. Perhaps digests are not being run long enough? also, pchBA mutagenesis was unsuccessful.
  2. start isoamyl alcohol generating device work
    • PCR BAT2 and THI3 again to get higher DNA concentrations for digesting/ligating on 8/3
  3. team meeting to discuss topics for meeting
  4. (3 pm) meeting with advisors
  5. run gel of PCR products/PCR cleanup and nanodrop
  6. make liquid cultures A,B,C from each potentially useful transformant plate:

meeting topics

  1. troubleshoot pchBA primers
  2. troubleshoot pchBA mutagenesis

liquid cultures from potentially useful plates

  1. 7/31 plates: 4, 5, 6, 7, 8
  2. 8/1 plates: 7, 8, 9