IGEM:MIT/2006/Notebook/2006-8-31: Difference between revisions

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==to do==
==to do==
#miniprep iGEM yeast shuttle vector and digest it appropriately (check the MCS, or Veena took notes and might know). Also digest our BGD (J45200,J45220) appropriately to insert it at the MCS
#dilute 4 plate reader LCs 1:500 and load w/Barry at 9 am
#analyze incoming 12 sample sequencing (and throw out duplicates if these all look good)
#glycerol (6) J45399 LCs (note: 2XYT problem)
#primers should be arriving today, so we should try to PCR pmsCEAB-full out of PE3 and pE3R (minipreps of both plasmids from 8/29)
#check if the 0-Q-199A forward sequencing is in from the re-run and also analyze the incoming 12 sample sequencing order (and throw out duplicates/bad ones)
#sequence J45220-C-mut with internal ATF1 primers
#miniprep iGEM yeast shuttle vector and digest it appropriately. Also digest our BGD (J45200,J45220) appropriately to insert it at the MCS
#ligate BGD into yeast shuttle vector and transform into top10
#pellet with big centrifuge and resuspend yeast cells in milk and find a good bread recipe
#pellet with big centrifuge and resuspend yeast cells in milk and find a good bread recipe
#ligate BGD into yeast shuttle vector and transform into top10
#pick colonies from all 8/30 transformant plates
 
==ongoing help==
#'''UPDATE REGISTRY''': create registry biobrick parts and choose numbers for our inverter constructs (w/ and w/out osmY attached) '''as well as put all intermediate BGD, IAGD, SAGD parts into the registry!!!!''' - p.s. anybody out of town is welcome to help. we seem to be very behind on this.

Revision as of 13:57, 30 August 2006

to do

  1. dilute 4 plate reader LCs 1:500 and load w/Barry at 9 am
  2. glycerol (6) J45399 LCs (note: 2XYT problem)
  3. primers should be arriving today, so we should try to PCR pmsCEAB-full out of PE3 and pE3R (minipreps of both plasmids from 8/29)
  4. check if the 0-Q-199A forward sequencing is in from the re-run and also analyze the incoming 12 sample sequencing order (and throw out duplicates/bad ones)
  5. sequence J45220-C-mut with internal ATF1 primers
  6. miniprep iGEM yeast shuttle vector and digest it appropriately. Also digest our BGD (J45200,J45220) appropriately to insert it at the MCS
  7. ligate BGD into yeast shuttle vector and transform into top10
  8. pellet with big centrifuge and resuspend yeast cells in milk and find a good bread recipe
  9. pick colonies from all 8/30 transformant plates

ongoing help

  1. UPDATE REGISTRY: create registry biobrick parts and choose numbers for our inverter constructs (w/ and w/out osmY attached) as well as put all intermediate BGD, IAGD, SAGD parts into the registry!!!! - p.s. anybody out of town is welcome to help. we seem to be very behind on this.