IGEM:MIT/2006/Notebook/2006-9-1: Difference between revisions
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#glycerol: all LCs '''-done''' | #glycerol: all LCs '''-done''' | ||
#start a smell test: add precursor to the LCs of 0-Q-119 and O-Q-199 '''-done, results don't | #start a smell test: add precursor to the LCs of 0-Q-119 and O-Q-199 '''-done, however, results don't look good''' | ||
#am miniprep (12): J45397 (1), J45398 (1), J45399 (3), J45299 (3), J45319 (3), pE3 (1) '''-done''' | #am miniprep (12): J45397 (1), J45398 (1), J45399 (3), J45299 (3), J45319 (3), pE3 (1) '''-done''' | ||
#analyze: incoming 20 sample sequencing order '''-done''' | #analyze: incoming 20 sample sequencing order '''-done''' | ||
#*throw out bad sequences '''-done''' | #*throw out bad sequences '''-done''' |
Latest revision as of 12:01, 1 September 2006
to do
- glycerol: all LCs -done
- start a smell test: add precursor to the LCs of 0-Q-119 and O-Q-199 -done, however, results don't look good
- am miniprep (12): J45397 (1), J45398 (1), J45399 (3), J45299 (3), J45319 (3), pE3 (1) -done
- analyze: incoming 20 sample sequencing order -done
- throw out bad sequences -done
- digest: J45299 (3) and J45319 (3) with XP -done
- run a gel
- sequence: (32 wells) -done
- J45220-C-mut with ATF1 primers -done
- all other minipreps (except pE3) -done
- J45398-no mut: 3,4,6,7 -done
- PCR: pmsCEAB out of pE3(new) and pE3R -done
- adjust annealing time, check GC content, ask advisor advice on PCRing large coding regions -done
- clean up??
- run a gel
- graph the plate reader data (call stephen)
- 3-part ligate/transform into A/C backbone:
- J45299:XP with R0011:ES
- J45319:XP with R0011:ES
- pellet: yeast cells in big centrifuge, resuspend in milk, try baking
- ask samantha for help
- pm miniprep: iGEM yeast
- follow yeast miniprep protocol, vortex cells first, ask samantha for help
- we can do XS digest/freeze of yeast miniprep on monday and ligate/transform with ATF1 when samantha is around and when we have tried out the bread machine