IGEM:MIT/2006/Notebook/2007-8-18: Difference between revisions

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1. Fluorescent experiment setup:
1. Fluorescent experiment setup:


* After 20 hours of growth, dilute 1:250 in 25-mL cultures in 250-mL flasks and shake for 4 hours at 220 RPM at 37C
* After 20 hours of growth, dilute 1:250 in 25-mL cultures in 250-mL flasks and shake for 4 hours at 220 RPM at 37C- DONE


* Take OD600s of those 25-mL cultures
* Take OD600s of those 25-mL cultures- DONE


*Dilute the cultures 1:25 in 25-mL culture in 250-mL flasks adjusting for OD600 and shake for 50 mins at 220 RPM at 37C
*Dilute the cultures 1:25 in 25-mL culture in 250-mL flasks adjusting for OD600 and shake for 50 mins at 220 RPM at 37C- DONE


*Extract 200 uL from each culture three times and make triplicate cultures for each part
*Calculations:


2. Obtain B-PER for GC lysis experiment- CONTACTED TOM AND AUSTIN (AWAITING REPLY)
R0040.E0840- 0.42 OD600- 2.667 mL to 22.3 mL media


3. Start a time course for J45120 and J45181 late at night
J45995- 1.02 OD600- 1.098 mL to 23.9 mL media
 
J45996- 1.12 OD600- 1 mL to 24 mL media
 
B0015- 0.48 OD600- 2.333 mL to 22.7 mL media
 
*Extract 200 uL from each culture three times and make triplicate cultures for each part- DONE
 
2. Obtain B-PER for GC lysis experiment- CONTACTED TOM AND AUSTIN, SAID TO ASK SAUER LAB, ASKED SAUER LAB (THEY HAVE IT BUT ONLY AS PERSONAL STOCK), EMAILED BIOSTUFF (NO RESPONSE)
 
3. Start a time course for J45120 and J45181 late at night- CAN"T DO WITHOUT LYSIS SOLUTION


4. Smell J45250 1AT3 culture with added precursor- DONE (SMELLS!)
4. Smell J45250 1AT3 culture with added precursor- DONE (SMELLS!)


5. Make LC out of a colony from streaked out J45250 1AT3 plate
5. Make LC out of a colony from streaked out J45250 1AT3 plate- DONE


6. Contact Lily about specifics of GC run tomorrow
6. Contact Lily about specifics of GC run tomorrow- DONE

Latest revision as of 16:30, 18 August 2007

Things to Do Today

1. Fluorescent experiment setup:

  • After 20 hours of growth, dilute 1:250 in 25-mL cultures in 250-mL flasks and shake for 4 hours at 220 RPM at 37C- DONE
  • Take OD600s of those 25-mL cultures- DONE
  • Dilute the cultures 1:25 in 25-mL culture in 250-mL flasks adjusting for OD600 and shake for 50 mins at 220 RPM at 37C- DONE
  • Calculations:

R0040.E0840- 0.42 OD600- 2.667 mL to 22.3 mL media

J45995- 1.02 OD600- 1.098 mL to 23.9 mL media

J45996- 1.12 OD600- 1 mL to 24 mL media

B0015- 0.48 OD600- 2.333 mL to 22.7 mL media

  • Extract 200 uL from each culture three times and make triplicate cultures for each part- DONE

2. Obtain B-PER for GC lysis experiment- CONTACTED TOM AND AUSTIN, SAID TO ASK SAUER LAB, ASKED SAUER LAB (THEY HAVE IT BUT ONLY AS PERSONAL STOCK), EMAILED BIOSTUFF (NO RESPONSE)

3. Start a time course for J45120 and J45181 late at night- CAN"T DO WITHOUT LYSIS SOLUTION

4. Smell J45250 1AT3 culture with added precursor- DONE (SMELLS!)

5. Make LC out of a colony from streaked out J45250 1AT3 plate- DONE

6. Contact Lily about specifics of GC run tomorrow- DONE