IGEM:MIT/2008/Notebook/Yogurt/Notes: Difference between revisions

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Line 18: Line 18:
*potential eptiopes
*potential eptiopes
**FLAG (Asp-Tyr-Lys-Asp-Asp-Asp-Asp-Lys)
**FLAG (Asp-Tyr-Lys-Asp-Asp-Asp-Asp-Lys)
**C-myc
**C-myc (EQKLISEEDL)
**              (-_+___---+)
**HA (YPYDUPDYA: #2)
**      (___-__-__)

Revision as of 08:47, 16 June 2008

JUN 10

JUN 16

Summary of individual tasks to research:

  1. S. Mutans metabolism pathway-Asad
  2. L. bulgaricus metabolism pathway-Allin
  3. secretion (full or partial)-John
  4. other secretion systems (introduction of)-Sara
  5. T7 as a promoter (L. bulgaricus)-Prarthna
  6. L. bulgaricus transformation/protocols-Derek
  7. binding assay protocols-Andrew
  8. epitope sequence

Linear Sequence/Design

Ex-promoter-RBS-ATG-signal-epitope-p1025-linker (TEV cleavage site)-GFP-His-TAATAA-termination-SP (see attached link for image of linear sequence)

  • Base pairs: 35-10-3-90-30-60-45-700-15-6-8
  • potential eptiopes
    • FLAG (Asp-Tyr-Lys-Asp-Asp-Asp-Asp-Lys)
    • C-myc (EQKLISEEDL)
    • (-_+___---+)
    • HA (YPYDUPDYA: #2)
    • (___-__-__)
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