IGEM:Paris Bettencourt 2012/Notebooks/Semantic group/annexe: Difference between revisions

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Geneious file : [[Image:Semantic.geneious]] (right click, save under...)
Geneious file : [[Image:Semantic.geneious]] (right click, save under...)


===KanR all serines changed===
===P-KanR all serines changed-S===
<code>   
<code>   
   GAATTCGCGGCCGCTTCTAGATGTAGCATATTCAACGGGAAACGTAGTGC
   GAATTCGCGGCCGCTTCTAGATGTAGCATATTCAACGGGAAACGTAGTGC
Line 55: Line 55:
   TTGCAGTTTCATTTGATGCTCGATGAGTTTTTCTAATACTAGTAGCGGCC
   TTGCAGTTTCATTTGATGCTCGATGAGTTTTTCTAATACTAGTAGCGGCC
   GCTGCAG
   GCTGCAG
</code>  
</code>
 
=== Fragment 1 ===
=== Fragment 1 ===
<code>
<code>

Latest revision as of 02:32, 9 July 2012

Notebook Design Roadmap Meetings and to-dos Protocols Bibliography Previous Biosafety iGEM projects


Semantic containment project

Annexes


Sequences

Prefix 1

Before sequences starting with ATG GAATTCGCGGCCGCTTCTAG

Prefix 2

Before sequences starting with no ATG GAATTCGCGGCCGCTTCTAGAG

Suffix

TACTAGTAGCGGCCGCTGCAG

Plasmid 1 : pSB3C5::S0/1/6


NB :

  • P- & -S means Prefix and Suffix added


Geneious file : File:Semantic.geneious (right click, save under...)

P-KanR all serines changed-S

 GAATTCGCGGCCGCTTCTAGATGTAGCATATTCAACGGGAAACGTAGTGC
 TAGAGGCCGCGATTAAATTAGAACATGGATGCTGATTTATATGGGTATAA
 ATGGGCTCGCGATAATGTCGGGCAATAGGGTGCGACAATCTATCGATTGT
 ATGGGAAGCCCGATGCGCCAGAGTTGTTTCTGAAACATGGCAAAGGTTAG
 GTTGCCAATGATGTTACAGATGAGATGGTCAGACTAAACTGGCTGACGGA
 ATTTATGCCTCTTCCGACCATCAAGCATTTTATCCGTACTCCTGATGATG
 CATGGTTACTCACCACTGCGATCCCCGGGAAAACAGCATTCCAGGTATTA
 GAAGAATATCCTGATTAGGGTGAAAATATTGTTGATGCGCTGGCAGTGTT
 CCTGCGCCGGTTGCATTAGATTCCTGTTTGTAATTGTCCTTTTAACTAGG
 ATCGCGTATTTCGTCTCGCTCAGGCGCAATAGCGAATGAATAACGGTTTG
 GTTGATGCGTAGGATTTTGATGACGAGCGTAATGGCTGGCCTGTTGAACA
 AGTCTGGAAAGAAATGCATAAGCTTTTGCCATTCTAGCCGGATTAGGTCG
 TCACTCATGGTGATTTCTAGCTTGATAACCTTATTTTTGACGAGGGGAAA
 TTAATAGGTTGTATTGATGTTGGACGAGTCGGAATCGCAGACCGATACCA
 GGATCTTGCCATCCTATGGAACTGCCTCGGTGAGTTTTAGCCTTAGTTAC
 AGAAACGGCTTTTTCAAAAATATGGTATTGATAATCCTGATATGAATAAA
 TTGCAGTTTCATTTGATGCTCGATGAGTTTTTCTAATACTAGTAGCGGCC
 GCTGCAG

Fragment 1

 GAATTCGCGGCCGCTTCTAGATGTAGCATATTCAACGGGAAACGTAGTGC
 TAGAGGCCGCGATTAAATTAGAACATGGATGCTGATTTATATGGGTATAA
 ATGGGCTCGCGATAATGTCGGGCAATAGGGTGCGACAATCTATCGATTGT
 ATGGGAAGCCCGATGCGCCAGAGTTGTTTCTGAAACATGGCAAAGGTTAG
 GTTGCCAATGATGTTACAGATGAGATGGTCAGACTAAACTGGCTGACGGA
 ATTTATGCCTCTTCCGACCATCAAGCATTTTATCCGTACTCCTGATGATG
 CATGGTTACTCACCACTGCGATCCCCGGGAAAACAGCATTCCAGGTATTA
 GAAGAATATCCTGATTAGGGTGAAAATATTGTTGATGCGCTGGCAGTGTT
 CCTGCGCCGGTTGCATTAGATTCCTGTTTGTAATTGTCCTTTTAACTAGG
 ATCGCGTATTTCGTCTCGCTCAGGCGCAATAGCGAATGAATAACG

Fragment 2

 GATTAGGGTGAAAATATTGTTGATGCGCTGGCAGTGTTCCTGCGCCGGTT
 GCATTAGATTCCTGTTTGTAATTGTCCTTTTAACTAGGATCGCGTATTTC
 GTCTCGCTCAGGCGCAATAGCGAATGAATAACGGTTTGGTTGATGCGTAG
 GATTTTGATGACGAGCGTAATGGCTGGCCTGTTGAACAAGTCTGGAAAGA
 AATGCATAAGCTTTTGCCATTCTAGCCGGATTAGGTCGTCACTCATGGTG
 ATTTCTAGCTTGATAACCTTATTTTTGACGAGGGGAAATTAATAGGTTGT
 ATTGATGTTGGACGAGTCGGAATCGCAGACCGATACCAGGATCTTGCCAT
 CCTATGGAACTGCCTCGGTGAGTTTTAGCCTTAGTTACAGAAACGGCTTT
 TTCAAAAATATGGTATTGATAATCCTGATATGAATAAATTGCAGTTTCAT
 TTGATGCTCGATGAGTTTTTCTAATACTAGTAGCGGCCGCTGCAG

Plasmid 2 : pSB1A3::supD_T1

BBa_K228001 - SupD-tRNA

 CAATTCGGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCTAAAACCGG
 AGTAGGGGCAACTCTACCGGGGGTTCAAATCCCCCTCTCTCCGCCACTAC
 AGATCCTTAGCGAAAGCTAAGGATTTTTTTTAAGCT

BBa_B1006 - Terminator 1

AAAAAAAAACCCCGCCCCTGACAGGGCGGGGTTTTTTTT

Scripts