IGEM:The Citadel/Resources

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==Research Papers==
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'''Research Papers'''
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''Missing a link to something you need?  The world is not like OWW and restricted access is still alive and well in certain circles (big circles too).  If you can't find a paper listed below, shoot me *'''[[User:Brian D. Burnley|Brian D. Burnley]] 05:52, 9 April 2010 (EDT)''': an email.''
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''Can't get to something below?  The world is not yet your oyster - restricted access is still alive and well in certain circles.  If you can't find a paper listed below, shoot me '''[[User:Brian D. Burnley|Brian D. Burnley]] 05:52, 9 April 2010 (EDT)''': an email.''
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'''Biobrick-related'''
 
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* Knight, Tom. [http://web.mit.edu/synbio/release/docs/biobricks.pdf Idempotent Vector Design for Standard Assembly of Biobricks]
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<u>Foundations</u>
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* Kelly, Jason. [http://www.jbioleng.org/content/3/1/4 Measuring the activity of BioBrick promoters using an in vivo reference standard]
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'''Bacterial Social Communication'''
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* Elowitz, Michael. [http://www.nature.com/nature/journal/v403/n6767/abs/403335a0.html A synthetic oscillatory network of transcriptional regulators.]
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* Gardner, Timothy. [http://www.nature.com/nature/journal/v403/n6767/abs/403339a0.html Construction of a genetic toggle switch in Escherichia coli.]
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* Tabor, Jeffrey.  [http://www.cell.com/retrieve/pii/S0092867409005091 A synthetic genetic edge detection program.]
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* Knight, Tom. [http://web.mit.edu/synbio/release/docs/biobricks.pdf Idempotent Vector Design for Standard Assembly of Biobricks.]
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* Kelly, Jason. [http://www.jbioleng.org/content/3/1/4 Measuring the activity of BioBrick promoters using an in vivo reference standard.]
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* Tal Danino.  A synchronized quorum of genetic clocks
 
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<u>Bacterial Social Communication</u>
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==Protocols==
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* Danino, Tal. [http://www.nature.com/nature/journal/v463/n7279/full/nature08753.html A synchronized quorum of genetic clocks.]
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[http://ginkgobioworks.com/support/ 3A Biobrick Assembly]
 
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<u>Energy</u>
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==Important Links==
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* Feng, Xueyang. [http://aem.asm.org/cgi/content/full/75/15/5001 Characterization of the Central Metabolic Pathways in Thermoanaerobacter  sp. Strain X514 via Isotopomer-Assisted Metabolite Analysis]
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<u>Technology</u>
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* Wang, Harris. [http://www.nature.com/nature/journal/v460/n7257/full/nature08187.html Programming cells by multiplex genome engineering and accelerated evolution.]
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<u>''In Silico''</u>
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* Villalobos, Alan. [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1523223/ Gene Designer: a synthetic biology tool for constructing artificial DNA segments]
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'''Protocols'''
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* [http://ginkgobioworks.com/support/ 3A Biobrick Assembly]
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* [http://ginkgobioworks.com/files/FooCampersGuide.pdf The Foo Camper's Guide to Biological Engineering]
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* [[IGEM:The_Citadel/Electrocompetent_Cells| The Citadel's Preparing Electrocompetent Cells]]
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* [[IGEM:The_Citadel/PCR_Protocol| The Citadel's PCR Protocol]]
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'''Important Links'''
* [http://2010.igem.org/Main_Page| 2010 iGEM Competition]
* [http://2010.igem.org/Main_Page| 2010 iGEM Competition]
* [http://partsregistry.org/Main_Page| Parts Registry]
* [http://partsregistry.org/Main_Page| Parts Registry]
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==Tools==
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'''Tools'''
* [http://www.ncbi.nlm.nih.gov/ National Center for Biotechnology Information]
* [http://www.ncbi.nlm.nih.gov/ National Center for Biotechnology Information]
* [http://www.biology.utah.edu/jorgensen/wayned/ape/ Plasmid Editor]
* [http://www.biology.utah.edu/jorgensen/wayned/ape/ Plasmid Editor]
* [http://ws.g-language.org/g4/ Pathway Projector]
* [http://ws.g-language.org/g4/ Pathway Projector]
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* [http://www.cbs.dtu.dk/services/NetNGlyc/ N-Glycosylation Predictor]
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==Tutorials & Lessons==
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'''Tutorials & Lessons'''
* [[Arking:JCAOligoTutorialHome| Excellent Tutorial Series on the Foundations of SynBio]]
* [[Arking:JCAOligoTutorialHome| Excellent Tutorial Series on the Foundations of SynBio]]
* [http://2009.igem.org/Instructional_Videos| iGEM Instructional Videos]
* [http://2009.igem.org/Instructional_Videos| iGEM Instructional Videos]
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* [http://partsregistry.org/Help:Contents| Everything you Want to Know About BioBricks]
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* [http://partsregistry.org/Help:Contents| Everything You Want to Know About BioBricks]
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* [[Searching_the_literature| A Guide to Searching the Literature]]
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==Blogs==
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'''Blogs'''
* [http://scienceblogs.com/oscillator/ Oscillator] by [[User:ChristinaAgapakis| Christina Agapakis]]
* [http://scienceblogs.com/oscillator/ Oscillator] by [[User:ChristinaAgapakis| Christina Agapakis]]

Current revision

Home Team Project Notebook Events Resources Multimedia Contact Us

Research Papers

Can't get to something below? The world is not yet your oyster - restricted access is still alive and well in certain circles. If you can't find a paper listed below, shoot me Brian D. Burnley 05:52, 9 April 2010 (EDT): an email.


Foundations


Bacterial Social Communication


Energy


Technology


In Silico


Protocols

Important Links


Tools


Tutorials & Lessons


Blogs

Personal tools