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		<id>http://www.openwetware.org/index.php?title=IGEM:Virginia_2012/Protocols/Phage_Replication_Rate_Assay&amp;feed=atom&amp;action=history</id>
		<title>IGEM:Virginia 2012/Protocols/Phage Replication Rate Assay - Revision history</title>
		<link rel="self" type="application/atom+xml" href="http://www.openwetware.org/index.php?title=IGEM:Virginia_2012/Protocols/Phage_Replication_Rate_Assay&amp;feed=atom&amp;action=history"/>
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		<updated>2013-05-23T03:07:57Z</updated>
		<subtitle>Revision history for this page on the wiki</subtitle>
		<generator>MediaWiki 1.13.2</generator>

	<entry>
		<id>http://www.openwetware.org/index.php?title=IGEM:Virginia_2012/Protocols/Phage_Replication_Rate_Assay&amp;diff=604719&amp;oldid=prev</id>
		<title>Joseph J. Muldoon: /* Overview */</title>
		<link rel="alternate" type="text/html" href="http://www.openwetware.org/index.php?title=IGEM:Virginia_2012/Protocols/Phage_Replication_Rate_Assay&amp;diff=604719&amp;oldid=prev"/>
				<updated>2012-05-30T03:32:15Z</updated>
		
		<summary type="html">&lt;p&gt;&lt;span class=&quot;autocomment&quot;&gt;Overview&lt;/span&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 03:32, 30 May 2012&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 1:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 1:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;==Overview==&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;==Overview==&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;Below is the procedure for measuring the rate of replication of a phage inside a certain organism. The bacteriophage and the organism are cultured together, and &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;sample &lt;/del&gt;are taken and titered at 0, 3, and 6 hours.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;Below is the procedure for measuring the rate of replication of a phage inside a certain organism. The bacteriophage and the organism are cultured together, and &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;samples &lt;/ins&gt;are taken and titered at 0, 3, and 6 hours.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;==Materials==&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;==Materials==&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-05-23 03:07:57 --&gt;
&lt;/table&gt;</summary>
		<author><name>Joseph J. Muldoon</name></author>	</entry>

	<entry>
		<id>http://www.openwetware.org/index.php?title=IGEM:Virginia_2012/Protocols/Phage_Replication_Rate_Assay&amp;diff=604699&amp;oldid=prev</id>
		<title>Jacqueline K. Grimm at 20:50, 29 May 2012</title>
		<link rel="alternate" type="text/html" href="http://www.openwetware.org/index.php?title=IGEM:Virginia_2012/Protocols/Phage_Replication_Rate_Assay&amp;diff=604699&amp;oldid=prev"/>
				<updated>2012-05-29T20:50:47Z</updated>
		
		<summary type="html">&lt;p&gt;&lt;/p&gt;

			&lt;table style=&quot;background-color: white; color:black;&quot;&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;col class='diff-marker' /&gt;
			&lt;col class='diff-content' /&gt;
			&lt;tr valign='top'&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;←Older revision&lt;/td&gt;
				&lt;td colspan='2' style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 20:50, 29 May 2012&lt;/td&gt;
			&lt;/tr&gt;
		&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 13:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 13:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Take 1 mL from the bacterial culture and add it to ~20 mL of liquid LB medium.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Take 1 mL from the bacterial culture and add it to ~20 mL of liquid LB medium.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Add phage suspension to the bacterial culture.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Add phage suspension to the bacterial culture.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Take a 500 μl sample and put it in the &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;freezer&lt;/del&gt;.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Take a 500 μl sample and put it in the &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;4 degree fridge&lt;/ins&gt;.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Put the bacteria/phage mixture in the incubator.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Put the bacteria/phage mixture in the incubator.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt;-&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Take 500 μl samples and put them in the &lt;del class=&quot;diffchange diffchange-inline&quot;&gt;freezer &lt;/del&gt;after 3 hours and 6 hours.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# Take 500 μl samples and put them in the &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;4 degree fridge &lt;/ins&gt;after 3 hours and 6 hours.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# For each of the three samples, [http://openwetware.org/wiki/IGEM:Virginia_2012/Protocols/Phage_Isolation isolate the phage].&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# For each of the three samples, [http://openwetware.org/wiki/IGEM:Virginia_2012/Protocols/Phage_Isolation isolate the phage].&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# For each of the three samples, perform a [http://openwetware.org/wiki/IGEM:Virginia_2012/Protocols/Plaque_Assay plaque assay] to determine the phage titer.&lt;/div&gt;&lt;/td&gt;&lt;td class='diff-marker'&gt; &lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;# For each of the three samples, perform a [http://openwetware.org/wiki/IGEM:Virginia_2012/Protocols/Plaque_Assay plaque assay] to determine the phage titer.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;!-- diff generator: internal 2013-05-23 03:07:57 --&gt;
&lt;/table&gt;</summary>
		<author><name>Jacqueline K. Grimm</name></author>	</entry>

	<entry>
		<id>http://www.openwetware.org/index.php?title=IGEM:Virginia_2012/Protocols/Phage_Replication_Rate_Assay&amp;diff=604637&amp;oldid=prev</id>
		<title>Jacqueline K. Grimm: New page: ==Overview==  Below is the procedure for measuring the rate of replication of a phage inside a certain organism. The bacteriophage and the organism are cultured together, and sample are ta...</title>
		<link rel="alternate" type="text/html" href="http://www.openwetware.org/index.php?title=IGEM:Virginia_2012/Protocols/Phage_Replication_Rate_Assay&amp;diff=604637&amp;oldid=prev"/>
				<updated>2012-05-29T17:18:04Z</updated>
		
		<summary type="html">&lt;p&gt;New page: ==Overview==  Below is the procedure for measuring the rate of replication of a phage inside a certain organism. The bacteriophage and the organism are cultured together, and sample are ta...&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;==Overview==&lt;br /&gt;
&lt;br /&gt;
Below is the procedure for measuring the rate of replication of a phage inside a certain organism. The bacteriophage and the organism are cultured together, and sample are taken and titered at 0, 3, and 6 hours.&lt;br /&gt;
&lt;br /&gt;
==Materials==&lt;br /&gt;
&lt;br /&gt;
*Liquid LB medium&lt;br /&gt;
*Bacterial culture&lt;br /&gt;
*Phage suspension&lt;br /&gt;
&lt;br /&gt;
==Procedure==&lt;br /&gt;
&lt;br /&gt;
# Take 1 mL from the bacterial culture and add it to ~20 mL of liquid LB medium.&lt;br /&gt;
# Add phage suspension to the bacterial culture.&lt;br /&gt;
# Take a 500 μl sample and put it in the freezer.&lt;br /&gt;
# Put the bacteria/phage mixture in the incubator.&lt;br /&gt;
# Take 500 μl samples and put them in the freezer after 3 hours and 6 hours.&lt;br /&gt;
# For each of the three samples, [http://openwetware.org/wiki/IGEM:Virginia_2012/Protocols/Phage_Isolation isolate the phage].&lt;br /&gt;
# For each of the three samples, perform a [http://openwetware.org/wiki/IGEM:Virginia_2012/Protocols/Plaque_Assay plaque assay] to determine the phage titer.&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
Please feel free to post comments, questions, or improvements to this protocol. Happy to have your input!&lt;br /&gt;
&lt;br /&gt;
&amp;lt;!-- Please sign your name to your note by adding &amp;lt;font face=&amp;quot;courier&amp;quot;&amp;gt;&amp;lt;nowiki&amp;gt;'''*~~~~''':&amp;lt;/nowiki&amp;gt;&amp;lt;/font&amp;gt; to the beginning of your tip.--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
&amp;lt;!-- If this protocol has papers or books associated with it, list those references here.--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Contact==&lt;br /&gt;
*Who has experience with this protocol?&lt;br /&gt;
&lt;br /&gt;
or instead, [[Talk:{{PAGENAME}}|discuss this protocol]]. &lt;br /&gt;
&lt;br /&gt;
&amp;lt;!-- You can tag this protocol with various categories.  See the [[Categories]] page for more information. --&amp;gt;&lt;br /&gt;
[[Category:Protocol]]&lt;br /&gt;
&amp;lt;!-- Move the relevant categories above this line to tag your protocol with the label&lt;br /&gt;
[[Category:Protocol]]&lt;br /&gt;
&lt;br /&gt;
[[Category:Needs attention]]&lt;br /&gt;
 &lt;br /&gt;
[[Category:In vitro]]&lt;br /&gt;
&lt;br /&gt;
[[Category:In vivo]]&lt;br /&gt;
&lt;br /&gt;
[[Category:In silico]]&lt;br /&gt;
&lt;br /&gt;
[[Category:DNA]]&lt;br /&gt;
&lt;br /&gt;
[[Category:RNA]]&lt;br /&gt;
&lt;br /&gt;
[[Category:Protein]]&lt;br /&gt;
&lt;br /&gt;
[[Category:Chemical]]&lt;br /&gt;
&lt;br /&gt;
[[Category:Escherichia coli]]&lt;br /&gt;
&lt;br /&gt;
[[Category:Yeast]]&lt;br /&gt;
--&amp;gt;&lt;/div&gt;</summary>
		<author><name>Jacqueline K. Grimm</name></author>	</entry>

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