Janet B. Matsen:Useful Links

From OpenWetWare

(Difference between revisions)
Jump to: navigation, search
(Useful Links)
(Useful Links)
Line 14: Line 14:
*[http://ecosal.org/ EcoSal]  !!subscription required!!  (I don't have it at UW)
*[http://ecosal.org/ EcoSal]  !!subscription required!!  (I don't have it at UW)
** an E. Coli & Salmonella reference website (originally, this info was published in books)
** an E. Coli & Salmonella reference website (originally, this info was published in books)
 +
*[https://salis.psu.edu/software/reverse RBS strength calculator]
 +
** Recomended by Amanda Smith  (she says the Klavins lab uses a different one)
 +
**The sequence matters a lot!  (If using the Elowitz RBS, the sequence between this part & the ATG matters!
 +
** Elowitz RBS + BioBrick Scar site + ATG --> ~ 14000 units of transcription, I think.
==Equipment==
==Equipment==

Revision as of 13:04, 27 June 2012

Back to Janet

Useful Links

  • BioNumbers
    • Save time searching for cell facts such as cellular volume or concentration of ATP
  • Finnzyme Primer Dimer Predictor
    • Enter yours here see predicted dimers
  • BitesizeBio
    • They have short but useful articles on lab technique and often include references. I am not a fan of all the advertising.
  • emolecules
    • See who sells compounds you want to buy. Will help you shop around & give more options when your default supplier shows a compound as being back-ordered.
  • BenchFly: free science videos
  • EcoSal  !!subscription required!! (I don't have it at UW)
    • an E. Coli & Salmonella reference website (originally, this info was published in books)
  • RBS strength calculator
    • Recomended by Amanda Smith (she says the Klavins lab uses a different one)
    • The sequence matters a lot! (If using the Elowitz RBS, the sequence between this part & the ATG matters!
    • Elowitz RBS + BioBrick Scar site + ATG --> ~ 14000 units of transcription, I think.

Equipment

Software

  • APE (A Plasmid Editor; free)
  • Mendeley (free)
  • InkScape (free)
Personal tools