Jewett Lab: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
(Replacing page with '{{Template:Jewett Lab}}')
No edit summary
Line 1: Line 1:
{{Template:Jewett Lab}}
{{Template:Jewett Lab}}
{| cellspacing="2px" cellpadding="0" border="0" style="padding: 0px; width: 700px; color: #000000; background-color: #ffffff;"
|-valign="top"
|width=450px style="padding: 5px; background-color: #ffffff; border: 2px solid #F8B603;" |
<h3><font style="color:#F8B603;">Research</font></h3>
How do organisms adapt to different environments?  We are interested in understanding the genetic and molecular changes that take place as organisms adapt to different environments.  Which genes change, what types of genetic changes occur, and how do these changes affect the organism at the biochemical, physiological, and ecological levels?
Since plants are rooted in their environment, they are particularly adept at coping with their environment.  Furthermore different species, and populations within species, have adapted to different environments.  Therefore plants are well suited for studying adaptation mechanisms.
Because light is fundamental to plant growth, we have focused on how plants sense and respond to environmental light cues.  We are focused on light perception by the phytochrome photoreceptors.  Phytochromes sense red and far-red light and provide information about the density of neighboring foliage (among other things).
We work on ''Arabidopsis thaliana'' and related species and use a combination of molecular genetic, quantitative genetic, and molecular evolution techniques.  Please see [http://www.naturalvariation.org naturalvariation.org] for information about some of our collaborators who are taking similar approaches.
[[Jewett_Lab:Research | read more...]]
|width=135px style="padding: 5px; background-color: #ffffff; border: 2px solid #C9D3EB;" |
<h3><font style="color:#C9D3EB;">Lab Members</font></h3>
*[[Jewett_Lab:Julin_Jewett|Julin Jewett]]
*[[Jewett_Lab:Daniele_Filiault|Daniele Filiault]]
*[[Jewett_Lab:Jose_M._Jimenez-Gomez|Jose M Jimenez-Gomez]]
*[[user:Patricia_Mueller-Moule|Patricia Mueller-Moule]]
*[[Jewett_Lab:Amanda_Schrager|Amanda Schrager]]
*[[Jewett_Lab:Danelle_Seymour|Danelle Seymour]]
*[[Jewett_Lab:An_Tat|An Tat]]
<h3><font style="color:#C9D3EB;">Former Members</font></h3>
*[[Maloof_Lab:Kazunari_Nozue|Kazunari Nozue]]
*[[Maloof_Lab:Matthew Schultz|Matthew Schultz]]
*[[Maloof_Lab:Jose Solis|Jose Solis]]
*[http://www.bio.indiana.edu/facultyresearch/faculty/Moyle.html Leonie Moyle]
*Andrea Wills
*[http://upg.duke.edu/studentlife/wessinger.html Carrie Wessinger]
*[[Maloof_Lab:Melissa_Pytlak|Melissa Pytlak]]
*[[Maloof_Lab:Celia_Futch|Celia Futch]]
*[[Maloof_Lab:Ana_Mitchell|Ana Mitchell]]
*[[Maloof_Lab:Andii_Wallace|Andii Wallace]]
|}
{| cellspacing="2px" cellpadding="0" border="0" style="padding: 0px; width: 700px; color: #000000; background-color: #ffffff;"
|-valign="top"
|width=300px rowspan=3 style="padding: 5px; background-color: #ffffff; border: 2px solid #C9D3EB;" |
<h3><font style="color:#C9D3EB;">Publications</font></h3>
*Jiménez-Gómez JM, & Maloof JN (2009) Plant research accelerates along the (bio)informatics superhighway: symposium on plant sensing, response and adaptation to the environment. [http://www.nature.com/embor/journal/v10/n6/full/embor2009116.html EMBO Rep 10: 568-72].
*Jimenez-Gomez JM, & Maloof JN (2009) Sequence diversity in three tomato species: SNPs, markers, and molecular evolution. [http://www.biomedcentral.com/1471-2229/9/85 BMC Plant Biol 9: 85].
*Filiault DL, Wessinger CA, Dinneny JR, Lutes J, Borevitz JO, Weigel D, Chory J and Maloof JN. (2008) Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light. [http://www.pnas.org/cgi/content/full/105/8/3157 PNAS 105, 3157-3162].
*Nozue K, Covington MF, Duek PD, Lorrain S, Fankhauser C, Harmer SL, Maloof JN. (2007) Rhythmic growth explained by coincidence between internal and external cues. [http://www.nature.com/nature/journal/v448/n7151/abs/nature05946.html Nature 448, 358-361].
*[[Maloof_Lab:Publications | see complete list...]]
|width=200px style="padding: 5px; background-color: #ffffff; border: 2px solid #F8B603;" |
<h3><font style="color:#F8B603;">Announcements</font></h3>
*[[Maloof_Lab:Group_meeting|Group meeting, journal clubs, and seminars]]
|-valign="top"
|style="padding: 5px; background-color: #ffffff; border: 2px solid red;" |
<h3><font style="color:red">Funding</font></h3>
*[http://www.nsf.gov/funding/pgm_summ.jsp?pims_id=5338&org=BIO NSF Plant Genome Research Program]
**[http://www-plb.ucdavis.edu/Labs/sinha/TomatoGenome/ GEPR: Elucidating gene networks regulating development in tomato]
**[[Maloof_Lab:PGRP | Molecular evolutionary genetics of crop and weed responses to
crowding]] (2002-2008)
*[http://www.hfsp.org/ Human Frontier Science Program] (2004-2008)
|-align="center"
|style="padding: 10px; background-color: #ffffff;" |
[http://www4.clustrmaps.com/user/60a714c2 http://www4.clustrmaps.com/stats/maps-no_clusters/malooflab.openwetware.org--thumb.jpg]
|}
__NOTOC__

Revision as of 09:13, 12 April 2010

Research

How do organisms adapt to different environments? We are interested in understanding the genetic and molecular changes that take place as organisms adapt to different environments. Which genes change, what types of genetic changes occur, and how do these changes affect the organism at the biochemical, physiological, and ecological levels?

Since plants are rooted in their environment, they are particularly adept at coping with their environment. Furthermore different species, and populations within species, have adapted to different environments. Therefore plants are well suited for studying adaptation mechanisms.

Because light is fundamental to plant growth, we have focused on how plants sense and respond to environmental light cues. We are focused on light perception by the phytochrome photoreceptors. Phytochromes sense red and far-red light and provide information about the density of neighboring foliage (among other things).

We work on Arabidopsis thaliana and related species and use a combination of molecular genetic, quantitative genetic, and molecular evolution techniques. Please see naturalvariation.org for information about some of our collaborators who are taking similar approaches.

read more...

Lab Members

Former Members

Publications

  • Jiménez-Gómez JM, & Maloof JN (2009) Plant research accelerates along the (bio)informatics superhighway: symposium on plant sensing, response and adaptation to the environment. EMBO Rep 10: 568-72.
  • Jimenez-Gomez JM, & Maloof JN (2009) Sequence diversity in three tomato species: SNPs, markers, and molecular evolution. BMC Plant Biol 9: 85.
  • Filiault DL, Wessinger CA, Dinneny JR, Lutes J, Borevitz JO, Weigel D, Chory J and Maloof JN. (2008) Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light. PNAS 105, 3157-3162.
  • Nozue K, Covington MF, Duek PD, Lorrain S, Fankhauser C, Harmer SL, Maloof JN. (2007) Rhythmic growth explained by coincidence between internal and external cues. Nature 448, 358-361.

Announcements

Funding

http://www4.clustrmaps.com/stats/maps-no_clusters/malooflab.openwetware.org--thumb.jpg