Kim:Publications

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PUBLICATIONS (104)

Summary: 31 journal papers, 11 issued or pending patents, 54 peer reviewed conference proceedings, 20 meeting abstracts, 4 book chapters Direct any questions regarding publications or reprints to Dr. Kim; [deokho@uw.edu]

Selected Publications

D.H. Kim, H.J. Lee, Y.K. Lee, J.M. Nam, and A. Levchenko, "Biomimetic nanopatterns as enabling tools for analysis and control of live cells," Advanced Materials, 2010. Pubmed, Hubmed

K. Gupta, D.H. Kim, D. Ellison, C. Smith, A. Kundu, K.Y. Suh, J. Tuan, and A. Levchenko, “Lab-on-a-chip devices as an emerging platform for stem cell biology,” Lab on a Chip, vol. 10, pp.2019-2031, 2010. Pubmed, Hubmed (Selected as one of the ten most accessed Lab on a Chip articles in August)

M.H. You, M.K. Kwak, D.H. Kim, K. Kim, A. Levchenko, D.Y. Kim, and K.Y. Suh, “Synergistically enhanced osteogenic differentiation of human mesenchymal stem cells by culture on nanostructured surfaces with induction media,” Biomacromolecules, vol. 11, pp.1856-1862, 2010. Pubmed, Hubmed

D.H. Kim, E. Lipke, P. Kim, R. Cheong, S. Edmonds, M. Delannoy, K.Y. Suh, L.Tung, and A. Levchenko, "Nanoscale cues regulate the structure and function of macroscopic cardiac tissue constructs," Proceedings of National Academy of Sciences USA, vol.107, pp. 565-570, 2010. Pubmed, Hubmed (Highlighted in the National Institute of Biomedical Imaging and Bioengineering)

K.J. Chang, D.H. Kim, S.M. Kim, A. Levchenko, and K.Y. Suh, “Micropatterned polymer structures for cell and tissue engineering,” Biological Responsive Hybrid Biomaterials, E. Jabbari and A. Khademhosseini (Eds.), Artech House Publishers, invited chaper, pp. 101-120, 2010.

D.H. Kim#, P. Wong, J.Y. Park, A. Levchenko, and Y. Sun#, "Microengineered platform for cell mechanobiology," Annual Review of Biomedical Engineering, vol. 11, pp.203-233, 2009. (# denotes corresponding authors) Pubmed

D.H. Kim, C. Seo, K. Han, K. Kwon, A. Levchenko and K.Y. Suh, "Guided cell migration on microtextured substrates with variable local density and anisotropy," Advanced Functional Materials, vol.19, pp.1579-1586, 2009. (Featured as a Frontispiece) Pubmed, Hubmed

D.H. Kim, K. Han, K. Gupta, K. Kwon, K.Y. Suh, and A. Levchenko, "Mechanosensitivity of fibroblast cell shape and movement to anisotropic substratum topography gradients," Biomaterials, vol. 30, pp. 5433-5444, 2009. Pubmed, Hubmed

J. Kim, M. Junkin, D.H. Kim, S.L. Kwon, Y.S. Shin, P. K. Wong, and B. K. Gale, "Applications, techniques, and microfluidic interfacing for nanoscale biosensing," Microfluidics and Nanofluidics, vol. 7, pp. 149-167, 2009. http://dx.doi.org/10.1016/j.snb.2005.11.051

D.H. Kim, A. Levchenko, and K.Y. Suh, "Engineered surface nanotopography for controlling cell-substrate interactions," Micro- and Nanoengineering of the Cell Microenvironment: Technologies and Applications, A. Khademhosseini, J. Borenstein, S. Takayama, and M. Toner (Eds.), Artech House Publishers, invited chapter, pp. 185-208, 2008.

Y. Sun, D.H. Kim, and A. Hashemi, "Biological cell sorting automation," Life Science Automation: Fundamentals and Applications, M.J. Zhang, B.J. Nelson and R.A. Felder (Eds.), Artech House Publishers, invited chapter, pp. 411-434, 2007.

D.H. Kim, J.Y. Park, K.Y. Suh, P. Kim, S.K. Choi. S.C. Ryu, S.H. Park, S.H. Lee and B. Kim, "Fabrication of patterned micromuscles with high activity for powering biohybrid microdevices", Sensors and Actuators B, vol. 117, pp.391-400, 2006. http://dx.doi.org/10.1016/j.snb.2005.11.051

K.Y. Suh, H.E. Jeong, D.H. Kim, A.R. Singh, and E.S. Yoon, "Capillarity-assisted fabrication of nanostructures using less permeable mold for nanotribological applications," Journal of Applied Physics, vol.100, 2006. http://dx.doi.org/10.1063/1.2222071

D.H. Kim, P. Kim, I.S. Song, J.M. Cha, S.H. Lee, B. Kim, and K.Y. Suh, "Guided three-dimensional growth of functional cardiomyocytes on polyethylene glycol nanostructures," Langmuir, vol.22, no.12, pp.5419-5426, 2006. > Pubmed, Hubmed

E.S. Yoon, R.A. Singh, H.S. Kong, B. Kim, D.H. Kim, H.E. Jeong, and K.Y. Suh, “Tribological properties of bio-mimetic nano-patterned polymeric surfaces on silicon wafer,” Tribology Letters, vol.21, pp.31-37, 2006. (the Society of Tribologists and Lubrication Engineers, Surface Engineering Best Paper Award) http://dx.doi.org/10.1007/s11249-005-9005-4

D.H. Kim, C.N. Hwang, Y. Sun, B. Kim, S.H. Lee, and B. Nelson, "Mechanical analysis of chorion softening in pre-hatching stages of zebrafish embryos," IEEE Transactions on Nanobioscience, vol.5, no.2, pp.89-94, 2006. Pubmed, Hubmed

J.Y. Park, S.M. Kim, D.H. Kim, B. Kim, S.J. Kwon, J.O. Park, and K.I. Lee, "Identification and control of a sensorized microgripper for micromanipulation," IEEE/ASME Transactions on Mechatronics, vol.10, no.5, pp.601-606, 2005. http://dx.doi.org/10.1109/TMECH.2005.856103

P.N. Kim, D.H. Kim, B. Kim, S.K. Choi, S.H. Lee, A. Khademhosseini, R. Langer, and K.Y. Suh, "Fabrication of nanostructures of poly(ethylene glycol) for application to protein adsorption and cell adhesion," Nanotechnology, vol.16, pp.2420-2426, 2005. http://dx.doi.org/10.1088/0957-4484/16/10/072

B. Kim, D.H. Kim, J.H. Jung, and J.O. Park, "A biomimetic undulatory tadpole robot using ionic polymer-metal composite actuators," Smart Materials and Structures, vol. 14, pp.1579-1585, 2005. http://dx.doi.org/10.1088/0964-1726/14/6/051

D.H. Kim, M.G. Lee, B. Kim, and Y. Sun, "A superelastic alloy microgripper with embedded electromagnetic actuators and piezoelectric sensors: a numerical and experimental study," Smart Materials and Structures, vol.14, pp.1265-1272, 2005. http://dx.doi.org/10.1088/0964-1726/14/6/019

D.H. Kim, Y. Sun, S. Yun, S.H. Lee, and B. Kim, "Investigating chorion softening of zebrafish embryos with a microrobotic force sensing system," Journal of Biomechanics, vol.38, no.6, pp.1359-1363, 2005. Pubmed, Hubmed

A. Haake, A. Neild, D.H. Kim, J.E. Ihm, Y. Sun, J. Dual, and B.K. Ju, "Manipulation of cells using an ultrasonic pressure field," Ultrasound in Medicine and Biology, vol.31, no.6, pp.857-864, 2005. Pubmed, Hubmed

D.H. Kim, B. Kim, and H.J. Kang, "Development of a piezoelectric polymer-based sensorized microgripper for micromanipulation and microassembly", Microsystem Technologies, vol.10, no.4, pp.275-280, 2004. http://dx.doi.org/10.1007/s00542-003-0330-y

Peer Reviewed Conference Proceedings

1. P. Kim, D.H. Kim, B. Kim, S.K. Choi, S.H. Lee, A. Khademhosseini, R. Langer, and K.Y. Suh, “Fabrication of Nanostructures of Poly(ethylene glycol) and its Application to Protein Adsorption and Cell Adhesion,” The 9th International Conference on Miniaturized Systems for Chemistry and Life Science (μTAS), Boston, USA, Oct. 9-13, 2005.
2. D.H. Kim, P. Kim, K.Y. Suh, S.K. Choi, S.H. Lee, and B. Kim, “Modulation of Adhesion and Growth of Cardiac Myocytes by Surface Nanotopography,” Proceedings of 27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Shanghai, China, Sept 1-4, 2005.
3. E.S. Yoon, A.R. Singh, H.S. Kong, B. Kim, D.H. Kim, K.Y. Suh, and H.E. Jeong, “Tribological Properties of Nano/Micro-Patterned PMMA Surfaces on Silicon Wafer,” ASME World Tribology Congress, Washington D.C. USA, Sep. 12-16, 2005.
4. S.H. Park, S.C. Ryu, D.H. Kim, and B. Kim, “Contractile Force Measurements of Cardiac Myocytes Using a Micromanipulation System,” IEEE/RSJ International Conference on Intelligent Robots and Systems, Alberta, Canada, Aug. 2-6, 2005.
5. S.C. Ryu, S.H. Park, D.H. Kim, and B. Kim, “Comparative Quantification of Contractile Force of Cardiac Muscles Using a Micromechanical Force Sensing System,” International Conference on Control, Automation and System, 2005. (Best Presentation Award)
6. P. Kim, D.H. Kim, B. Kim, S. Choi, S.H. Lee, A. Khademhosseinid, R. Langer, K.Y. Suh, “Fabrication of nanostructures of PEG and its application”, KSME Annual Spring Meetings, 2005.
7. D.H. Kim, K.Y. Suh, P. Kim, S.K. Choi, S.H. Lee, and B. Kim, “Micropatterning of Cardiomyocytes Using Adhesion-Resistant Polymeric Microstructures,” The 13th International Conference on Solid State Sensors, Actuators and Microsystems, pp.1664-1667, Seoul, Korea, June 5-9, 2005.
8. D.H. Kim, J.Y. Park, K.Y. Suh, P. Kim, S.K. Choi, S.H. Lee, and B. Kim, “Three-Dimensionally Patterned Cardiomyocytes with High Activity for Powering Bio-Hybrid Microdevices,” the 3rd Annual International IEEE Conference on Microtechnologies in Medicine and Biology, Hawaii, pp.233-236, USA, May 12-15, 2005.

29. D.H. Kim, J.Y. Park, B. Kim, and K.S. Hong, “AFM-based Identification of the Dynamic Properties of Globular Proteins,” IEEE International Conference on Industrial Electronics, Busan, Korea, Nov. 2-6, 2004. 30. D.H. Kim, M.G. Lee, B. Kim, and J.H. Shim, “A Superelastic Alloy Microgripper with Embedded Electromagnetic Actuators and Piezoelectric Sensors,” SPIE Optomechatronic Micro/Nano Components, Devices, and Systems, Philadelphia, USA, Oct. 25-28, 2004. 31. D.H. Kim*, A. Haake*, Y. Sun, A.P. Neild, J.E. Ihm, J. Dual, J.A. Hubbell, B.K. Ju, and B.J. Nelson, “High- Throughput Cell Manipulation Using Ultrasound Fields,” IEEE International Conference on Engineering in Medicine and Biology Society (EMBS), pp.2571-2574, Sept., 2004. (* the first two authors contributed equally) 32. D.H. Kim, Y. Sun, S. Yun, B. Kim, C.N. Hwang, S.H. Lee, and B.J. Nelson, “Mechanical Property Characterization of the Zebrafish Embryo Chorion,” IEEE International Conference on Engineering in Medicine and Biology Society (EMBS), pp.5061-5064, Sept., 2004. 33. D.H. Kim, S. Yun, and B. Kim, “Mechanical Force Response of Single Living Cells using a Microrobotic System,” IEEE International Conference on Robotics and Automation, pp.5013-5018, New Orleans, LA, USA, April 26-May 1, 2004. 34. D.H. Kim, B. Kim, S. Yun, and S.J. Kwon, “Cellular Force Measurement for Force Reflected Biomanipulation,” IEEE International Conference on Robotics and Automation, pp.2412-2417, New Orleans, LA, USA, April 26-May 1, 2004. 35. J.Y. Park, S.M. Kim, D.H. Kim, B. Kim, S.J. Kwon, J.O. Park, and K.I. Lee, “Advanced Controller Design and Implementation of a Sensorized Microgripper for Micromanipulation,” IEEE International Conference on Robotics and Automation, pp.5025-5032, New Orleans, LA, USA, April 26-May 1, 2004. 36. B. Kim, D.H, Kim, G.T. Park, and J.O. Park, “Hybrid Microassembly with Sensory Feedback for Photonics Applications," The 2nd International Conference on Mechatronics and Information Technology, Jecheon, Korea, December 4-6, 2003. 37. D.H. Kim, B. Kim, H.J. Kang and J.O. Park, “Force Feedback-based Microassembly System Integrated with a Piezoelectrically Sensorized Microgripper,” The 2nd International Conference on Mechatronics and Information Technology (ICMIT), Jecheon, Korea, December 4-6, 2003. 38. D.H. Kim, S. Yun, B. Kim, C.N. Hwang, and S.H. Lee, “Measurement of Softening of the Chorion of Zebrafish Embryos During Early Development Including Prehatching Stage," International Symposium of Development and Reproduction, vol.3, PB-43, Seoul, Korea, October 30, 2003. 39. B. Kim, D.H. Kim, J.Y. Park, Y.H. Kim, S.J. Kwon, H.J. Kang, and S.H. Jung, “Autonomous Biomanipulation Factory for Manipulating Individual Embryo Cells," IEEE/RSJ International Conference on Intelligent Robots and Systems, pp.74-88, Las Vegas, USA, October 27-November 1, 2003. (Invited Paper, Workshop on Microrobotics for Biomanipulation) 40. B. Kim, H.J. Kang, D.H. Kim, G.T. Park, and J.O. Park, “Flexible Microassembly System based on Hybrid Manipulation Scheme," IEEE/RSJ International Conference on Intelligent Robots and Systems, pp.2061-2066, Las Vegas, USA, October 27-November 1, 2003. 41. D.H. Kim, B. Kim, H.J. Kang, and B.K. Ju, “Development of a Piezoelectric Polymer-based Sensorized Microgripper for Micromanipulation and Microassembly,” IEEE/RSJ International Conference on Intelligent Robots and Systems, pp.1864-1869, Las Vegas, USA, October 27-November 1, 2003. 42. S. Yun, D.H. Kim, B. Kim, S.H. Lee, and G.T. Park, "Real-Time Force Sensing in the Envelope of Zebrafish Egg during Micropipette Penetration," International Conference on Control, Automation and System, pp. 2451-2456, Kyeongju, Korea, October 22-25, 2003. 43. J.H. Shim, S.Y. Cho, Y.I. Cho, D.H. Kim, and B. Kim, "Design and Control of a New Micro End-Effector for Biological Cell Manipulation," International Conference on Control, Automation and System, pp. 2445-2450, Kyeongju, Korea, October 22-25, 2003. 44. D.H. Kim, B. Kim, H.J. Kang, and S.M. Kim, “Fabrication and Sensorization of a Superelastic Alloy Microrobot Gripper using Piezoelectric Polymer Sensors,” KSPE Spring Annual Meeting, pp. 251-255, June, 2003. (in Korean) 45. D.H. Kim, B. Kim, S. Youn, and H.J. Kang, “Cellular Force Measurement for Force Feedback-Based Biomanipulation,” KSPE Spring Annual Meeting, pp.237-240, June, 2003. (in Korean) 46. J.Y. Park, D.H. Kim, B. Kim, and K.I. Lee, “System Identification for Motion of Proteins using an AFMbased Nanorobotic Manipulation,” The 6th International Conference on Modeling and Simulation of Microsystem, San Francisco, USA, February 23-27, 2003. 47. S.J. Lee, K. Kim, D.H. Kim, J.O. Park, and G.T. Park, “Multiple Magnification Images Based Micropositioning for 3D Microassembly,” The Seventh International Conference on Control, Automation, Robotics and Vision (ICARCV’02), December 2-5, Singapore, pp.914-919, 2002. 48. T.S. Kim, J.Y. Park, D.H. Kim, and K.I. Lee, “Compact 3-DOF Mobile Microrobot for Micro/Nano Manipulation System,” International Conference on Control, Automation and System, pp. 947-951, Muju, Korea, October, 2002. 49. S.M. Kim, K. Kim, J.H. Shim, B. Kim, D.H. Kim, and C.C. Chung, “Position and Force Control of a Sensorized Microgripper,” International Conference on Control, Automation and System, pp. 319-322, Muju, Korea, October, 2002. 50. D.H. Kim, J.Y. Park, B. Kim, and K. Kim, “Modeling and Simulation for Nanorobotic Manipulation with an AFM probe,” International Conference on Control, Automation and System, pp. 2151-2156, Muju, Korea, October, 2002. 51. K. Kim, D.H. Kim, S.J. Lee, and J.H. Lee, “Hybrid Microassembly System for Three-Dimensional MEMS Components,” International Workshop on Microfactory, pp. 21-24, Minnesota, USA, September, 2002. 52. S.J. Lee, K. Kim, D.H. Kim, J.O. Park, and G.T. Park, “Vision-based Micromanipulation,” International Workshop on Microfactory, pp. 141-144, Minnesota, USA, September, 2002. 53. D.H. Kim, T.S. Kim, K. Kim, and B. Kim, “Motion Planning of an AFM-based Nanomanipulator in a Sensor-based Nanorobotic Manipulation System,” International Workshop on Microfactory, pp. 137-140, Minnesota, USA, September, 2002. 54. B. Kim, K. Kim, H.J. Kang, D.H. Kim, J.H. Lee, and S.M. Kim, "Hybrid Microassembly using Intelligent User Interface", The 10th G7-Advanced Manufacturing System Workshop, Seoul, Korea, Sept 6th, 2002 (in Korean). 55. D.H. Kim, K. Kim and J.W. Hong, “Implementation of Self-Sensing MEMS Cantilevers for Nanomanipulation,” The 4th Korean MEMS conference, pp.120-125, 2002. 56. S.J. Lee, K. Kim, D.H. Kim, J.O. Park, and G.T. Park. “Multiple Vision Based Micromanipulation System for 3D-Shaped Micro Parts Assembly”, International Conference on Control, Automation and System, pp.789-790, Jeju, Korea, October, 2001. 57. E.H. Song, D.H. Kim, K. Kim, and J.H. Lee., "Intelligent User Interface for Teleoperated Microassembly", International Conference on Control, Automation and System, pp. 1287-1290, Jeju, Korea, October , 2001. 58. D.H. Kim, Y.K. Kim, W. Choe., and. K. Kim, "Teleoperated Microassembly and its Application to Peg-in- Hole Task", International Conference on Control, Automation and System, pp. 784-788, Jeju, Korea, October , 2001. 59. S.J. Lee, K. Kim, D.H. Kim, J.O. Park, and G.T. Park., "Recognizing and Tracking 3D-Shaped Micro Parts Using Multiple Visions for Micromanipulation", IEEE International Symposium on Micromechatronics and Human Science, pp. 203-210, Nagoya, Japan, Septemper, 2001. 60. D.H. Kim, K. Kim, K.Y. Kim., and. S.M. Cha, "Dexterous Teleoperation for Micro Parts Handling based on Haptic/Visual Interface", IEEE International Symposium on Micromechatronics and Human Science, pp.211- 217, Nagoya, Japan, September, 2001. 61. K. Kim, S.M. Cha, and D.H. Kim, "Micro Manipulation Considering Human Interface," The 9th G7- Advanced Manufacturing System Workshop, Kyongju, Korea, Sept 9th, 2001 (in Korean). 62. S.J. Lee, K. Kim, D.H. Kim, J.O. Park, and G.T. Park, “Recognization of 3D-Shaped Micro Parts using Multiple Vision for Micromanipulation,” KIEE Summer Annual Meeting, 2001. (in Korean) 63. D.H. Kim, K. Kim, K.Y. Kim and J.O. Park, "Dexterous Teleoperation of Microassembly System," KSME Spring Annual Meeting, Vol.B, pp. 158~163. (KSME 01S182), 2001. (in Korean) 64. D.H. Kim, K.Y. Kim., and K. Kim., "A Micro Manipulation System based on Teleoperation Techniques," The 32rd International Symposium on Robotics (ISR 2001), Seoul, Korea, April, 2001. 65. K.Y. Kim, D.H. Kim, Y.K. Jeong, K. Kim and J.O. Park., "A Biological Man-Machine Interface for Teleoperation," The 32th International Symposium on Robotics (ISR 2001), Seoul, Korea, April, 2001. 66. B.K. Shin, D.H. Kim, J.O. Hahn, and K.I. Lee, "Adaptive Learning Shift Control of Smooth Shift Transients for Automotive Power Transmission Systems," Asian Control Conference, pp.1564-1569, Shanghai, China, July 4-7, 2000. 67. D.H. Kim, B.K. Shin, J.K. Choi and K.I. Lee, "Analysis on Dynamic Characteristics of Line Pressure Regulating System in Automatic Transmissions using Sensitivity Method," Proc. of KSPE Spring Annual Meeting, pp. 487-491, 2000 (in Korean). 68. D.H. Kim, B.K. Shin, K.S. Yi, and K.I. Lee, "Vehicle Driving Resistance Load Estimation for Longitudinal Motion Control," FISITA'2000, Seoul, Korea, June 12-15, 2000. 69. J.W Hur, J.O. Hahn, B.K. Shin, D.H. Kim., and K.I. Lee, "Identification of Automatic Transmission Shifting Hydraulic System Equipped with Proportional Solenoid Valve Using Neural Network," The 3rd International Workshop on Advanced Mechatronics (IWAM'99), pp. 60-64, ChunChon, Korea, December 2-4, 1999. 70. D.H. Kim, B.K. Shin, K.S. Yi, and K.I. Lee, "Observer Based Estimation of Driving Resistance Load for Vehicle Longitudinal Motion Control," Korean Automatic Control Conference-International, vol. E pp.185- 188, YongIn, Korea, October 14-16, 1999. 71. J.W. Hur, B.K. Shin, D.H. Kim, and K.I. Lee, "Identification of Automatic Transmission Shifting Hydraulic System Equipped with Proportional Solenoid Valve using Neural Networks," Korean Automatic Control Conference, vol. D, pp. 25-28, 1999. (in Korean) 72. D.H. Kim, B.K. Shin, J.O. Hahn and K.I. Lee, "Adaptive Shift Control Algorithm with Intelligent Supervision in Automatic Transmissions," KSME Fall Annual Meeting, vol.A, pp. 866-871, 1999. (Best Paper Award in Vehicle Dynamics and Control Session). (in Korean) 73. D.H. Kim, B.K. Shin, K.S. Yi and K.I. Lee, "Road Load Estimation for Smooth Shift Control of Automatic Transmission," KSPE Spring Annual Meeting, pp. 191-196, 1999. (Best Student Paper Award) (in Korean). 74. D.H. Kim, J.W. Hur, B.K. Shin, and K.I. Lee, "Smooth Shift Control of an Automatic Transmission using the Estimated Speed and Acceleration Signals,” KSME Spring Annual Meeting, vol.A., pp.167-174, 1999. (in Korean)