Koch Lab:Data/MT Gliding Assay Readme File: Difference between revisions

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Data are licensed CC0, as noted above.  You are not required, but if possible it would be cool if you give credit to us in any derived work.  Also, we might enjoy working with you if it is productive.  Contact info can be found here: [[Koch_Lab:Contact]].
Data are licensed CC0, as noted above.  You are not required, but if possible it would be cool if you give credit to us in any derived work.  Also, we might enjoy working with you if it is productive.  Contact info can be found here: [[Koch_Lab:Contact]].
==Data==
Raw data can be found at the following link.
* http://www.kochlab.org/files/Passivation/


==Software==
==Software==

Revision as of 12:30, 18 November 2010

This is the readme file for kochlab gliding assay and microtubule tracking data.
<html><!-- Open Data Link --> <a href="http://opendefinition.org/"> 

 <img alt="This material is Open Data" border="0"
 src="http://m.okfn.org/images/ok_buttons/od_80x15_blue.png" />

</a> <!-- /Open Data Link --> <p xmlns:dct="http://purl.org/dc/terms/" xmlns:vcard="http://www.w3.org/2001/vcard-rdf/3.0#"> 

 <a rel="license" href="http://creativecommons.org/publicdomain/zero/1.0/">
   <img src="http://i.creativecommons.org/l/zero/1.0/88x31.png" style="border-style: none;" alt="CC0" />
 </a>
 <br />
 To the extent possible under law, <a href="http://openwetware.org/wiki/Koch_Lab" rel="dct:publisher"><span property="dct:title">Steven J. Koch and other KochLab members</span></a>
 has waived all copyright and related or neighboring rights to
 <span property="dct:title">KochLab Data</span>.

This work is published from <span about="http://openwetware.org/wiki/Koch_Lab" property="vcard:Country" datatype="dct:ISO3166" content="US">United States</span>. </p> </html>

Credits

Raw data acquired by Andy Maloney. Tracking software by Larry Herskowitz and Steve Koch. Tracking automation by Larry Herskowitz. Data analysis and interpretation by Andy Maloney, Larry Herskowitz, Steve Koch. Kinesin-1 provided by Haiqing Liu (LANL).

Data are licensed CC0, as noted above. You are not required, but if possible it would be cool if you give credit to us in any derived work. Also, we might enjoy working with you if it is productive. Contact info can be found here: Koch_Lab:Contact.

Data

Raw data can be found at the following link.

Software

Our software will all be open-source. However, currently we have not yet gone through the steps to make sourceforge projects. Below is all of the software we used to analyze images, but it will probably be difficult to use without some instructions (which we haven't yet written). Unfortunately, some of even the compiled versions will require a NI-Vision license. Whereas all the source code will require LabVIEW development platform.

Microtubule image tracking, automated

Track smoothing and speed calculation, automated

Group speed analysis, automated

Related Publications

Related Notebook and Other Postings

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Example with tracks overlayed: <html><object width="425" height="344"><param name="movie" value="http://www.youtube.com/v/heaK44PW5ko&hl=en&fs=1"></param><param name="allowFullScreen" value="true"></param><param name="allowscriptaccess" value="always"></param><embed src="http://www.youtube.com/v/heaK44PW5ko&hl=en&fs=1" type="application/x-shockwave-flash" allowscriptaccess="always" allowfullscreen="true" width="425" height="344"></embed></object></html>

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