Koeris/Notebook/2007-1-15: Difference between revisions

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=Pseudomonas aeruginosa mer operon cloning 3=
 
==Preparation==
What can I do in order to make sure the cloning works this time?
*Check concentrations of the chromatin DNA: '''351 ng/ul'''
*Do a dilution series over two orders of magnitude of the template DNA: 3ng/ul - 300ng/ul
**All dilutions are to be done in at '''LEAST 100ul volume''' ddH<sub>2</sub>O
**Dilute stock 1:1.2: yields 300ng/ul
**Dilute twice 1:10: yields 30ng/ul and 3ng/ul
==PCR set-up of the operon==
#Master mix
##Template DNA equiv.
##ddH<sub>2</sub>O to 50uL
#Thermal profile
##92 deg C - 5min
##92 deg C - 30s
##50 deg C - 45s
##72 deg C - 120s
##4 deg C - indefinite
===Pipetting scheme===
{| border="1"
! Column heading 1 !! Column heading 2 !! Column heading 3
|-
! Row heading 1
| Cell 2 || Cell 3
|-
! Row heading A
|Cell B
|Cell C
|}
==Gel image==
1% agarose TAE gel, ran @ 100V for 60min

Latest revision as of 07:23, 13 February 2007