Koop:Sutherland: Difference between revisions

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{{Koop}}


I am a MSc student working in Dr. Ben Koop's lab at the University of Victoria
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<font size="2">Centre for Biomedical Research<br>
University of Victoria,<br>
PO Box 3020 STN CSC,<br>
Victoria, B.C. V8W 3N5<br>
Canada<br>
Phone: 250-472-4072<br>
Fax: 250-472-4075<br>
bens ^at^ uvic ^dot^ ca
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I am a PhD student working in Dr. Ben Koop's lab at the University of Victoria


== '''Research''' ==
== '''Research''' ==


I am currently studying the host-parasite interactions of salmon and sea lice at an organismal and molecular level. Using physiological data gene expression tools, I am trying to understand what leads to the varying susceptibility to sea lice (''Lepeophtheirus salmonis'') among different species, or development stages. To do this, we are using gene expression technology (microarray and qRT-PCR) as well as immunoassays.
My main interests involve studying external influences on gene transcription using systems-based tools. I am also interested in the use of this data to infer physiological responses and ecological consequences of the influences.
 
The main model that I am studying involves the host-parasite interactions of salmon and sea lice (''Lepeophtheirus salmonis'') at a physiological and molecular level. Mainly through transcriptomic investigation, I am trying to understand the mechanisms behind varying sensitivity to sea lice infections.
 
Additionally, I am investigating transcriptional responses of sea lice ''Lepeophtheirus salmonis'' to environmentally-relevent disturbances.
 
Identifying creative new ways to interpret large data sets is also of interest to me.


In addition, I am using microarrays and other expression technology to investigate the transcriptional response of ''Lepeophtheirus salmonis'' to a varying environmental salinity or temperature.
Currently Applying: microarrays (oligo and cDNA), relative quantitative real-time PCR, and immunoassays.

Latest revision as of 18:33, 28 September 2010

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Centre for Biomedical Research
University of Victoria,
PO Box 3020 STN CSC,
Victoria, B.C. V8W 3N5
Canada
Phone: 250-472-4072
Fax: 250-472-4075
bens ^at^ uvic ^dot^ ca

I am a PhD student working in Dr. Ben Koop's lab at the University of Victoria

Research

My main interests involve studying external influences on gene transcription using systems-based tools. I am also interested in the use of this data to infer physiological responses and ecological consequences of the influences.

The main model that I am studying involves the host-parasite interactions of salmon and sea lice (Lepeophtheirus salmonis) at a physiological and molecular level. Mainly through transcriptomic investigation, I am trying to understand the mechanisms behind varying sensitivity to sea lice infections.

Additionally, I am investigating transcriptional responses of sea lice Lepeophtheirus salmonis to environmentally-relevent disturbances.

Identifying creative new ways to interpret large data sets is also of interest to me.

Currently Applying: microarrays (oligo and cDNA), relative quantitative real-time PCR, and immunoassays.