Koop:Sutherland: Difference between revisions

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== '''Research''' ==
== '''Research''' ==


I am currently studying the host-parasite interactions of salmon and sea lice at an organismal and molecular level. Using physiological data gene expression tools, I am trying to understand what leads to the varying susceptibility to sea lice (''Lepeophtheirus salmonis'') among different species, or development stages. To do this, we are using gene expression technology (microarray and qRT-PCR) as well as immunoassays.
I am currently studying the host-parasite interactions of salmonids and sea lice (''Lepeophtheirus salmonis'') at an physiological and molecular level. Mainly using gene expression tools, I am trying to understand what leads to the diverse sensitivity ranges among salmonids (both of different species and of different host development stages). Tools: microarray (oligo and cDNA), qRT-PCR (SYBR) and immunoassays.


In addition, I am using microarrays and other expression technology to investigate the transcriptional response of ''Lepeophtheirus salmonis'' to a varying environmental salinity or temperature.
In addition, I am using microarrays and other expression technology to investigate the transcriptional response of ''Lepeophtheirus salmonis'' to a varying environmental salinity or temperature. This is important to understanding how free-swimming stages are effected by varying oceanic conditions.
 
Finding new ways to represent large data sets, as well as to pull reliable data from a 'noisy' data set are also of interest to me.

Revision as of 08:58, 8 August 2010

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Centre for Biomedical Research
University of Victoria,
PO Box 3020 STN CSC,
Victoria, B.C. V8W 3N5
Canada
Phone: 250-472-4072
Fax: 250-472-4075
bens ^at^ uvic ^dot^ ca

I am a MSc student working in Dr. Ben Koop's lab at the University of Victoria

Research

I am currently studying the host-parasite interactions of salmonids and sea lice (Lepeophtheirus salmonis) at an physiological and molecular level. Mainly using gene expression tools, I am trying to understand what leads to the diverse sensitivity ranges among salmonids (both of different species and of different host development stages). Tools: microarray (oligo and cDNA), qRT-PCR (SYBR) and immunoassays.

In addition, I am using microarrays and other expression technology to investigate the transcriptional response of Lepeophtheirus salmonis to a varying environmental salinity or temperature. This is important to understanding how free-swimming stages are effected by varying oceanic conditions.

Finding new ways to represent large data sets, as well as to pull reliable data from a 'noisy' data set are also of interest to me.