Lab meeting: Difference between revisions

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'''Kuramoto Model'''
'''Self-Organized Criticality'''


[http://journals.aps.org/rmp/abstract/10.1103/RevModPhys.77.137 Overview and applications of Kuramoto Model]
[http://journals.aps.org/pra/pdf/10.1103/PhysRevA.38.364]


[http://www.pnas.org/content/101/30/10955.full Modeling a synthetic multicellular clock: Repressilators coupled by quorum sensing]
[http://journals.aps.org/prl/pdf/10.1103/PhysRevLett.59.381]


[http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.0020080 Noise-Induced Min Phenotypes in E. coli]
'''Evolution of aging'''


[http://msb.embopress.org/content/10/7/739.abstract Robust synchronization of coupled circadian and cell cycle oscillators in single mammalian cells]
[http://onlinelibrary.wiley.com/doi/10.1111/j.1474-9726.2007.00281.x/full]


[http://journals.aps.org/pre/abstract/10.1103/PhysRevE.83.060901 Robust network clocks: Design of genetic oscillators as a complex combinatorial optimization problem]
[http://www.pnas.org/content/105/8/3076.full.pdf]
 
[http://tutorials.siam.org/dsweb/cotutorial/index.php?s=1&p=0 Tutorial of the Kuramoto Model]
 
'''Video'''
 
[https://www.youtube.com/watch?v=IiXaZGZqpVI Steven Strogatz TED Talk "Science of Sync"]
 
'''Viscek Model'''
 
[http://web.mit.edu/8.334/www/grades/projects/projects10/Hernandez-Lopez-Rogelio/dynamics_2.html Viscek Simply]
 
[http://journals.aps.org/prl/pdf/10.1103/PhysRevLett.75.1226 Novel  Type of Phase Transition in a System of Self-Driven Particles]
 
[http://www.nature.com/nature/journal/v407/n6803/pdf/407487a0.pdf  Simulating dynamical features of escape panic]
 
[http://journals.aps.org/prl/abstract/10.1103/PhysRevLett.104.184502  Large-Scale Collective Properties of Self-Propelled Rods]
 
[http://hal.elte.hu/~vicsek/downloads/papers/EurPhysJB64_451_2008.pdf  Modeling collective motion: variations on the Vicsek model]
 
[http://www.nature.com/nphys/journal/v10/n9/full/nphys3035.html  Information transfer and behavioural inertia in starling flocks]

Revision as of 06:12, 17 October 2016

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Self-Organized Criticality

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Evolution of aging

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