Li Lab:People: Difference between revisions

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A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings.  -- '''Uri Alon'''
A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings.  -- '''Uri Alon''' <br/>
[https://www.icloud.com/photostream/#A4JtdOXmGZvmDp '''Lab Pictures'''] 


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<h3>PI:[http://www.bcm.edu/mcb/?PMID=7802 Wei Li], PhD</h3>
<h3>PI:[http://www.bcm.edu/mcb/?PMID=7802 Wei Li] (李蔚), PhD</h3>
   
   


[[Image: Li_wei.jpg‎|center]]  
[[Image: Li_wei.jpg‎|center|150px|]]  
Associate Professor
'''Professor''' (tenured): 08/2016 - present<br/>
'''Associate Professor''' (tenured): 10/2011 - 07/2016<br/>
'''Assistant Professor''' (tenure track): 11/2007 - 09/2011<br/>
Division of Biostatistics, Dan L. Duncan Cancer Center<br/>
[http://www.bcm.edu/mcb/?PMID=7802 Department of Molecular and Cellular Biology ]<br/>
Baylor College of Medicine.<br/>


Division of Biostatistics, Dan L. Duncan Cancer Center and
'''Postdoctoral Fellow''':   06/2004 - 10/2007<br/>
[http://www.bcm.edu/mcb/?PMID=7802 Department of Molecular and Cellular Biology ],
Department of Biostatistics and Computational Biology<br/>
Baylor College of Medicine.
Dana Farber Cancer Institute<br/>
Inter-institutional Graduate [http://scbmb.bcm.tmc.edu/ Program in Structural and Computational Biology & Molecular Biophysics]
Harvard School of Public Health, Boston


Ph.D. in Bioinformatics, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China  
'''Bioinformatics Group Leader''':  01/2000 - 05/2004<br/>
Beijing Genomics Institute (BGI)<br/>
Chinese Academy of Sciences, Beijing, China
 
'''Ph.D. in Bioinformatics''':  09/1998 - 09/2003<br/>
Institute of Biophysics<br/>
Chinese Academy of Sciences, Beijing, China  
 
 
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<h3>Instructors </h3>


Postdoctoral Training, Dana Farber Cancer Institute/Harvard School of Public Health, Boston


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<h3>Postdoctoral Fellows </h3>  
<h3>Postdoctoral Fellows </h3>  


* Yuanxin Xi, PhD
* Hyun Jung Park, PhD (朴贤正 started 06.2012)
Ph.D. in Bioinformatics, University of California, Davis
Ph.D. in Computer Science, Rice University
[[Image: YxiBCM.tif|center|100px|]]  
[[Image: HJInDenver.jpg|center|150px|]]
 
 
 
* Benjamin Rodriguez, PhD
PhD in Integrated Biomedical Science, the Ohio State Univ
[[Image: BenBCM.jpeg |center|150px|]]  
 


* Jianzhong Su, PhD
PhD in Computational Epigenetics and Biological Mathematics, Harbin Institute of Technology, China.
[[Image: Jianzhong.png |center|150px|]]




* Liguo Wang, PhD
* Jie Lyu, PhD (started 01.2016)
Ph.D. in Genomics & Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China
Ph.D. in Computational Epigenetics and Developmental Biology, Harbin Institute of Technology, China.
[[Image: Liguow.jpg|center|100px|]]  
[[Image: Jielv.jpg |center|150px|]]




* Lei Li, PhD
PhD in Computational Biology, The Chinese University of Hong Kong
[[Image: Lei.jpg |center|150px|]]


* [http://kaifu.openwetware.org/ Kaifu Chen, PhD]
Ph.D. in Genomics & Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China
[[Image: kaifu.jpg|center|100px|]]


* Jiejun Shi, PhD
PhD in Biology, Tongji University, China
[[Image: Jiejun.jpg |center|150px|]]


* Xiaodong Cui, PhD
PhD in Electrical and Computer Engineering, University of Texas at San Antonio
[[Image: Xiaodong.jpg |center|150px|]]


<h3>Graduate Students</h3>


* [http://sun.openwetware.org Deqiang Sun, PhD]
* Xueqiu Lin (Tongji University)
Ph.D. in Condensed Matter Physics, Texas A&M University, College Station, Texas
[[Image: Xueqiulin.jpg|center|150px|]]  
[[Image: Test2.png|center|100px|]]  




* Hyojin Kang, PhD (joint with Prof. Huda Zoghbi)
*Jianfeng Xu
Ph.D., Department of Bio and Brain Engineering, KAIST, Korea
1st Year graduate student from MCB
[[Image: Hyojin.jpg|center|100px|]]
[[Image:jianx.jpg|center|150px|]]




* Hao Zhao, PhD
<h3>System Admin (High Performance Computing)</h3>
Ph.D. in Computer Science, City University of Hong Kong
* Michael D. Dehart
[[Image: US_visa.jpg|center|100px|]]  
B.S. in Computer Science, University of Houston Clear Lake
[[Image: Michael.JPG‎|center|150px|]]




* Xia Zheng, PhD
<h3> Lab Alumni </h3>
Ph.D. in Control Theory and Engineering, Zhejiang University, China
* [http://www.mayo.edu/research/faculty/wang-liguo-ph-d/bio-00055202 Liguo Wang, PhD]
[[Image: Zheng.JPG|center|100px|]]  
Postdoc Fellow: 06/2008 - 06/2012<br/>Current Position: tenure-track Assistant Professor at Mayo Clinic
[[Image: Liguow.jpg|center|150px|]]




<h3>Graduate Students</h3>
* [http://www.ibt.tamhsc.edu/faculty/sun-bio.html  Deqiang Sun, PhD]
Postdoc Fellow: 2010 - 2014 <br/>
Current Position: tenure-track Assistant Professor at Texas A&M IBT
[[Image: Test2.png|center|150px|]]


* Kadir Caner Akdemir (co-mentored with Dr. Michelle Barton)
Ph.D. student, UT MD Anderson Cancer Center, Houston, TX <br/>
B.S. in Computer Engineering, Yeditepe University, Istanbul, Turkey
[[Image: Kadir.jpg|center|100px|]]


* [http://chenlab.openwetware.org Kaifu Chen, PhD]
Postdoc Fellow: 2009-2013; instructor: 2013-2015 <br/>
Current Position: tenure-track Assistant Professor at Cornel University & Methodist Hospital
[[Image: kaifu.jpg|center|150px|]]


* Zeynep H Coban (co-mentored with Dr. Michelle Barton)
Ph.D. student, UT MD Anderson Cancer Center, Houston, TX <br/>
A.M in Biostatistics, Harvard University, Boston, MA <br/>
B.S. in Biological Sciences and Bioengineering, Sabanci University, Istanbul, Turkey
[[Image: Zeynep.jpg|center|100px|]]


* Yuanxin Xi, PhD
Postdoc/Instructor: 2008-2016  <br/>
Current Position: tenure-track Assistant Professor at UT Health (declined); now at MD Anderson
[[Image: YxiBCM.tif|center|150px|]]


* Shengqin Wang (visiting PhD student)
Ph.D. in Biomedical Engineering, Southeast University, Nanjing, China
[[Image: Shengqin.jpg|center|100px|]]


* Zheng Xia, PhD 夏铮 (CPRIT Keck Fellow)
Postdoc/Instructor: 2011-2016 <br/>
Current Position: tenure-track Assistant Professor at Oregon Health & Science University (OHSU)
[[Image: Zheng.JPG|center|150px|]]


* Junsheng Chen (visiting student)


<h4> Lab Alumni (co-mentored by Wei) </h4>


* Yuan Yuan (rotation student)
* Kadir Caner Akdemir
PhD student (co-mentored with Michelle Barton): 2011 - 2013 <br/>
Current Position: Postdoc Fellow at UT MD Anderson Cancer Center


* Zeynep H Coban (co-mentored with Michelle Barton)
PhD student, UT MD Anderson Cancer Center, 2011-2014 <br/>
Current Position: Postdoc Fellow at Baylor


<h3>System Admin (High Performance Computing)</h3>
* Teresa T. Yiu, PhD
* Michael D. Dehart
instructor: 2014-2015 (NCI R25T fellow; co-mentored with Melissa Bondy)<br/>Current Position: Teacher in a private school
B.S. in Computer Science, University of Houston Clear Lake
[[Image: Michael.JPG‎|center|100px|]]

Revision as of 14:08, 18 October 2016

Home        People        Publications        Collaborations        Software        Positions        Contact       


A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings. -- Uri Alon
Lab Pictures

PI:Wei Li (李蔚), PhD


Professor (tenured): 08/2016 - present
Associate Professor (tenured): 10/2011 - 07/2016
Assistant Professor (tenure track): 11/2007 - 09/2011
Division of Biostatistics, Dan L. Duncan Cancer Center
Department of Molecular and Cellular Biology
Baylor College of Medicine.

Postdoctoral Fellow: 06/2004 - 10/2007
Department of Biostatistics and Computational Biology
Dana Farber Cancer Institute
Harvard School of Public Health, Boston

Bioinformatics Group Leader: 01/2000 - 05/2004
Beijing Genomics Institute (BGI)
Chinese Academy of Sciences, Beijing, China

Ph.D. in Bioinformatics: 09/1998 - 09/2003
Institute of Biophysics
Chinese Academy of Sciences, Beijing, China


Instructors



Postdoctoral Fellows

  • Hyun Jung Park, PhD (朴贤正 started 06.2012)

Ph.D. in Computer Science, Rice University


  • Benjamin Rodriguez, PhD

PhD in Integrated Biomedical Science, the Ohio State Univ


  • Jianzhong Su, PhD

PhD in Computational Epigenetics and Biological Mathematics, Harbin Institute of Technology, China.


  • Jie Lyu, PhD (started 01.2016)

Ph.D. in Computational Epigenetics and Developmental Biology, Harbin Institute of Technology, China.


  • Lei Li, PhD

PhD in Computational Biology, The Chinese University of Hong Kong


  • Jiejun Shi, PhD

PhD in Biology, Tongji University, China

  • Xiaodong Cui, PhD

PhD in Electrical and Computer Engineering, University of Texas at San Antonio

Graduate Students

  • Xueqiu Lin (Tongji University)


  • Jianfeng Xu

1st Year graduate student from MCB


System Admin (High Performance Computing)

  • Michael D. Dehart

B.S. in Computer Science, University of Houston Clear Lake


Lab Alumni

Postdoc Fellow: 06/2008 - 06/2012
Current Position: tenure-track Assistant Professor at Mayo Clinic


Postdoc Fellow: 2010 - 2014
Current Position: tenure-track Assistant Professor at Texas A&M IBT


Postdoc Fellow: 2009-2013; instructor: 2013-2015
Current Position: tenure-track Assistant Professor at Cornel University & Methodist Hospital


  • Yuanxin Xi, PhD

Postdoc/Instructor: 2008-2016
Current Position: tenure-track Assistant Professor at UT Health (declined); now at MD Anderson


  • Zheng Xia, PhD 夏铮 (CPRIT Keck Fellow)

Postdoc/Instructor: 2011-2016
Current Position: tenure-track Assistant Professor at Oregon Health & Science University (OHSU)


Lab Alumni (co-mentored by Wei)

  • Kadir Caner Akdemir

PhD student (co-mentored with Michelle Barton): 2011 - 2013
Current Position: Postdoc Fellow at UT MD Anderson Cancer Center

  • Zeynep H Coban (co-mentored with Michelle Barton)

PhD student, UT MD Anderson Cancer Center, 2011-2014
Current Position: Postdoc Fellow at Baylor

  • Teresa T. Yiu, PhD

instructor: 2014-2015 (NCI R25T fellow; co-mentored with Melissa Bondy)
Current Position: Teacher in a private school

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