Li Lab:People

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A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings.  -- '''Uri Alon'''
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A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings.  -- '''Uri Alon''' <br/>
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[https://www.icloud.com/photostream/#A4JtdOXmGZvmDp '''Lab Pictures'''] 
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<h3>PI:[http://www.bcm.edu/mcb/?PMID=7802 Wei Li], PhD</h3>
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<h3>PI:[http://www.bcm.edu/mcb/?PMID=7802 Wei Li] (李蔚), PhD</h3>
   
   
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[[Image: Li_wei.jpg‎|center]]  
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[[Image: Li_wei.jpg‎|center|150px|]]  
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'''Associate Professor''' (tenured): 09/2011 - present<br/>
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'''Professor''' (tenured): 08/2016 - present<br/>
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'''Associate Professor''' (tenured): 10/2011 - 07/2016<br/>
'''Assistant Professor''' (tenure track): 11/2007 - 09/2011<br/>
'''Assistant Professor''' (tenure track): 11/2007 - 09/2011<br/>
Division of Biostatistics, Dan L. Duncan Cancer Center<br/>
Division of Biostatistics, Dan L. Duncan Cancer Center<br/>
[http://www.bcm.edu/mcb/?PMID=7802 Department of Molecular and Cellular Biology ]<br/>
[http://www.bcm.edu/mcb/?PMID=7802 Department of Molecular and Cellular Biology ]<br/>
Baylor College of Medicine.<br/>
Baylor College of Medicine.<br/>
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[http://scholar.google.com/citations?hl=en&user=7IUCbE4AAAAJ&view_op=list_works&pagesize=100 My Citations @ Google Scholar]
 
'''Postdoctoral Fellow''':    06/2004 - 10/2007<br/>
'''Postdoctoral Fellow''':    06/2004 - 10/2007<br/>
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<h3>Instructor </h3>  
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<h3>Instructors </h3>  
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* Yuanxin Xi, PhD
 
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Ph.D. in Bioinformatics, University of California, Davis
 
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[[Image: YxiBCM.tif|center|100px|]]
 
<h3>Postdoctoral Fellows </h3>  
<h3>Postdoctoral Fellows </h3>  
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* Hyun Jung Park, PhD (朴贤正 started 06.2012)
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Ph.D. in Computer Science, Rice University
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[[Image: HJInDenver.jpg|center|150px|]]
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* [http://kaifu.openwetware.org/ Kaifu Chen, PhD]
 
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Ph.D. in Genomics & Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China
 
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[[Image: kaifu.jpg|center|100px|]]
 
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* Benjamin Rodriguez, PhD
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PhD in Integrated Biomedical Science, the Ohio State Univ
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[[Image: BenBCM.jpeg |center|150px|]]
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* Jianzhong Su, PhD
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PhD in Computational Epigenetics and Biological Mathematics, Harbin Institute of Technology, China.
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[[Image: Jianzhong.png |center|150px|]]
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* [http://sun.openwetware.org Deqiang Sun, PhD]
 
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Ph.D. in Condensed Matter Physics, Texas A&M University, College Station, Texas
 
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[[Image: Test2.png|center|100px|]]
 
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* Jie Lyu, PhD (started 01.2016)
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Ph.D. in Computational Epigenetics and Developmental Biology, Harbin Institute of Technology, China.
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[[Image: Jielv.jpg |center|150px|]]
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* Xia Zheng, PhD
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* Lei Li, PhD  
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Ph.D. in Control Theory and Engineering, Zhejiang University, China
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PhD in Computational Biology, The Chinese University of Hong Kong
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[[Image: Zheng.JPG|center|100px|]]  
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[[Image: Lei.jpg |center|150px|]]
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* Jiejun Shi, PhD
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PhD in Biology, Tongji University, China
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[[Image: Jiejun.jpg |center|150px|]]
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* Hyun Jung Park, PhD
 
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Ph.D. in Computer Science, Rice University
 
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[[Image: HJInDenver.jpg|center|100px|]]
 
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* Xiaodong Cui, PhD
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PhD in Electrical and Computer Engineering, University of Texas at San Antonio
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[[Image: Xiaodong.jpg |center|150px|]]
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* Benjamin Rodriguez, PhD
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<h3>Graduate Students</h3>
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PhD in Integrated Biomedical Science, the Ohio State Univ
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*Jianfeng Xu
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2nd year graduate student, Molecular & Cellular Biology
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[[Image:jianx.jpg|center|150px|]]
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<h3>Graduate Students</h3>
 
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* Kadir Caner Akdemir (co-mentored with Dr. Michelle Barton)
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*Fanglue Peng
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Ph.D. student, UT MD Anderson Cancer Center, Houston, TX <br/>
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Graduate student, Molecular & Cellular Biology  <br/>
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B.S. in Computer Engineering, Yeditepe University, Istanbul, Turkey
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Co-mentored with Dr. Xi Chen
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[[Image: Kadir.jpg|center|100px|]]  
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[[Image:fanglue1.jpg|center|150px|]]
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* Zeynep H Coban (co-mentored with Dr. Michelle Barton)
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<h3>System Admin (High Performance Computing)</h3>
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Ph.D. student, UT MD Anderson Cancer Center, Houston, TX <br/>
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A.M in Biostatistics, Harvard University, Boston, MA <br/>
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B.S. in Biological Sciences and Bioengineering, Sabanci University, Istanbul, Turkey
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[[Image: Zeynep.jpg|center|100px|]]
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* Michael D. Dehart
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B.S. in Computer Science, University of Houston Clear Lake
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[[Image: Michael.JPG‎|center|150px|]]
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* Junsheng Chen (visiting student)
 
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<h3> Lab Alumni </h3>
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* Eric B. Rutledge (rotation student)
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* [http://www.mayo.edu/research/faculty/wang-liguo-ph-d/bio-00055202 Liguo Wang, PhD]
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Md/PhD student, BCM
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Postdoc Fellow: 06/2008 - 06/2012<br/>Current Position: tenure-track Assistant Professor at Mayo Clinic
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[[Image: Liguow.jpg|center|150px|]]
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<h3>System Admin (High Performance Computing)</h3>
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* [http://www.ibt.tamhsc.edu/faculty/sun-bio.html  Deqiang Sun, PhD]
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* Michael D. Dehart
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Postdoc Fellow: 2010 - 2014 <br/>
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B.S. in Computer Science, University of Houston Clear Lake
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Current Position: tenure-track Assistant Professor at Texas A&M IBT
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[[Image: Michael.JPG‎|center|100px|]]
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[[Image: Test2.png|center|150px|]]
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<h3> Lab Alumni </h3>  
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* [http://chenlab.openwetware.org Kaifu Chen, PhD]
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* Hao Zhao, PhD
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Postdoc Fellow: 2009-2013; instructor: 2013-2015 <br/>
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Ph.D. in Computer Science, City University of Hong Kong<br/>Postdoc Fellow: 07/2010 - 10/2011<br/>Current Position: Senior Statistical Analyst at MD Anderson Cancer Center
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Current Position: tenure-track Assistant Professor at Cornel University & Methodist Hospital
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[[Image: kaifu.jpg|center|150px|]]
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* Yuanxin Xi, PhD
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Postdoc/Instructor: 2008-2016  <br/>
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Current Position: tenure-track Assistant Professor at UT Health (declined); now at MD Anderson
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[[Image: YxiBCM.tif|center|150px|]]
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* Zheng Xia, PhD 夏铮 (CPRIT Keck Fellow)
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Postdoc/Instructor: 2011-2016 <br/>
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Current Position: tenure-track Assistant Professor at Oregon Health & Science University (OHSU)
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[[Image: Zheng.JPG|center|150px|]]
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* Xueqiu Lin (Tongji University)
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[[Image: Xueqiulin.jpg|center|150px|]]
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<h4> Lab Alumni (co-mentored by Wei) </h4>
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* Kadir Caner Akdemir
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PhD student (co-mentored with Michelle Barton): 2011 - 2013 <br/>
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Current Position: Postdoc Fellow at UT MD Anderson Cancer Center
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* Zeynep H Coban (co-mentored with Michelle Barton)
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PhD student, UT MD Anderson Cancer Center, 2011-2014 <br/>
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Current Position: Postdoc Fellow at Baylor
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* Liguo Wang, PhD
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* Teresa T. Yiu, PhD  
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Ph.D. in Genomics & Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China<br/>Postdoc Fellow: 06/2008 - 06/2012<br/>Current Position: Assistant Professor at Mayo Clinic
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instructor: 2014-2015 (NCI R25T fellow; co-mentored with Melissa Bondy)<br/>Current Position: Teacher in a private school
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[[Image: Liguow.jpg|center|100px|]]
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Current revision

Home        People        Publications        Collaborations        Software        Positions        Contact       


A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings. -- Uri Alon
Lab Pictures

Contents

PI:Wei Li (李蔚), PhD


Professor (tenured): 08/2016 - present
Associate Professor (tenured): 10/2011 - 07/2016
Assistant Professor (tenure track): 11/2007 - 09/2011
Division of Biostatistics, Dan L. Duncan Cancer Center
Department of Molecular and Cellular Biology
Baylor College of Medicine.

Postdoctoral Fellow: 06/2004 - 10/2007
Department of Biostatistics and Computational Biology
Dana Farber Cancer Institute
Harvard School of Public Health, Boston

Bioinformatics Group Leader: 01/2000 - 05/2004
Beijing Genomics Institute (BGI)
Chinese Academy of Sciences, Beijing, China

Ph.D. in Bioinformatics: 09/1998 - 09/2003
Institute of Biophysics
Chinese Academy of Sciences, Beijing, China


Instructors


Postdoctoral Fellows

  • Hyun Jung Park, PhD (朴贤正 started 06.2012)

Ph.D. in Computer Science, Rice University


  • Benjamin Rodriguez, PhD

PhD in Integrated Biomedical Science, the Ohio State Univ


  • Jianzhong Su, PhD

PhD in Computational Epigenetics and Biological Mathematics, Harbin Institute of Technology, China.


  • Jie Lyu, PhD (started 01.2016)

Ph.D. in Computational Epigenetics and Developmental Biology, Harbin Institute of Technology, China.


  • Lei Li, PhD

PhD in Computational Biology, The Chinese University of Hong Kong


  • Jiejun Shi, PhD

PhD in Biology, Tongji University, China


  • Xiaodong Cui, PhD

PhD in Electrical and Computer Engineering, University of Texas at San Antonio


Graduate Students

  • Jianfeng Xu

2nd year graduate student, Molecular & Cellular Biology


  • Fanglue Peng

Graduate student, Molecular & Cellular Biology
Co-mentored with Dr. Xi Chen


System Admin (High Performance Computing)

  • Michael D. Dehart

B.S. in Computer Science, University of Houston Clear Lake


Lab Alumni

Postdoc Fellow: 06/2008 - 06/2012
Current Position: tenure-track Assistant Professor at Mayo Clinic


Postdoc Fellow: 2010 - 2014
Current Position: tenure-track Assistant Professor at Texas A&M IBT


Postdoc Fellow: 2009-2013; instructor: 2013-2015
Current Position: tenure-track Assistant Professor at Cornel University & Methodist Hospital


  • Yuanxin Xi, PhD

Postdoc/Instructor: 2008-2016
Current Position: tenure-track Assistant Professor at UT Health (declined); now at MD Anderson


  • Zheng Xia, PhD 夏铮 (CPRIT Keck Fellow)

Postdoc/Instructor: 2011-2016
Current Position: tenure-track Assistant Professor at Oregon Health & Science University (OHSU)


  • Xueqiu Lin (Tongji University)


Lab Alumni (co-mentored by Wei)

  • Kadir Caner Akdemir

PhD student (co-mentored with Michelle Barton): 2011 - 2013
Current Position: Postdoc Fellow at UT MD Anderson Cancer Center

  • Zeynep H Coban (co-mentored with Michelle Barton)

PhD student, UT MD Anderson Cancer Center, 2011-2014
Current Position: Postdoc Fellow at Baylor

  • Teresa T. Yiu, PhD
instructor: 2014-2015 (NCI R25T fellow; co-mentored with Melissa Bondy)
Current Position: Teacher in a private school