Li Lab:news: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
No edit summary
No edit summary
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Template:Li Lab}}
{{Template:Li Lab}}
. 12/2013: Kaifu's aging nucleosome paper is accepted to ''' Genes & Development'''


. '''06/04/2009, New Postdoc (joint with Prof. Xuewen Pan)'''
. 12/2013: We received a 5-year NIH/NHGRI '''R01''' grant (scored at 6 percentile in its first submission) to study DNA Methylation


Kaifu Chen has accepted our postdoc offer. Kaifu has a PhD in Genomics and Bioinformatics from Beijing Institute of Genomics, Chinese Academy of Sciences.  Welcome Kaifu!
. 11/2013: Wei will serve on the Editorial Board of '''Molecular Endocrinology'''


. 09/2013:  Deqiang's DNA methylation Canyon paper is accepted to '''Nature Genetics'''.


. '''03/20/2009, [http://cancerepigenome.pbwiki.com/ Cancer Epigenomics Workshop]'''
. 09/2013:  Xueqiu's bisulfite sequencing quality control paper (BSeQC) is accepted to '''Bioinformatics'''.


Please join us on May 2nd (Saturday) 2009 at MD Anderson Cancer Center. This meeting is organized by Steffi Oesterreich, Wei Li and Jean-Pierre Issa.
. 08/2013:  Kadir's p53 paper is accepted to '''Nucleic Acids Research'''


. 01/2013:  [http://www.bcm.edu/news/item.cfm?newsID=6723 BCM News] and  [http://epigenie.com/danpos-reveals-dynamic-nucleosomes Epigenie Headline] about our recent work on nucleosome dynamics.


. '''03/18/2009, New Student'''
. 12/2012:  Liguo and HJ's CPAT RNA coding potential prediction paper is accepted to '''Nucleic Acids Research'''.


Julia Kristine Blackmore, a PhD student in BCM MCB dept., will be doing a two-month rotation in our lab.  
. 11/2012: Kaifu's nucleosome methodology paper DANPOS is accepted to '''Genome Research'''.


. 10/2012:  Kaifu's promoter nucleosome paper is accepted to '''Genome Research'''.


. '''03/16/2009, New Course'''
. 09/2012:  A '''NIH R01 grant''' was funded. We will work with Dr. Issa at Temple Univ. to understand DNA methylation in Cancer.


[http://sites.google.com/site/mcbseminar/ 320-466 MCB Seminar]
. 08/2012: A mouse ES nucleosome paper from Kaestner lab at Upenn is accepted to '''Cell'''. Kaifu and Wei used DANPOS to analyze the data and were listed as co-authors.


. 08/2012: Dr. Benjamin Rodriguez will join us as a '''Postdoc Associate'''. Ben has PhD in Integrated Biomedical Science from the Ohio State Univ. Welcome!


. '''01/21/2009, New Paper'''
. 08/2012:  A '''Mazzone Award ''' is funded. We will work with Dr. Balk at Harvard Medical School to understand the molecular features of aggressive prostate cancer.
. 06/2012: Liguo's RNA-seq Quality Control paper is accepted to '''Bioinformatics'''.


A paper titled 'Integrative analysis of HIF binding and transactivation reveals its role in maintaining histone methylation homeostasis' has been accepted by '''PNAS'''.
. 06/2012:  A '''NIH R01 grant''' is funded. We will work with Dr. Goodell at BCM to understand DNA methylation in Hematopoietic Stem Cell.
 
. 04/2012:  A '''NIH R01 grant''' is funded. We will work with Dr. Dent at MD Anderson to define USP22 functions during mammalian development.
 
. 04/2012:  Dr.Dean Tang's prostate cancer stem cell paper is accepted in '''Cell Stem Cell'''. Wei is a co-author.
 
. 02/2012:  Yuanxin's epigenetic paper with Katrin Chua lab at Stanford is accepted to '''Nature'''. Two years of hard work finally paid off!
 
. 02/2012:  Liguo Wang is offered a '''tenure-track Assistant Professor''' position at Mayo Clinic. Congratulations!
 
. 02/2012:  Justin Park will join us as a Postdoc Associate. Justin will graduate in May with a PhD in Computer Science from Rice University. Welcome!
 
. 11/2011:  Yuanxin's RRBSMAP paper was accepted to '''Bioinformatics'''.
 
. 09/2011:  Wei Li was promoted to tenured '''Associate Professor''' at BCM. Cheers!
 
. 09/2011:  Deqiang's DNA methylation paper with Peggy Goodell lab was accepted to '''Nature Genetics'''.
 
. 08/2011:  Kaifu's NSD2 epigenetic paper with Or Gozani lab at Stanford was accepted to '''Molecular Cell'''.
 
. 08/2011:  A '''NIH R01 grant''' was funded. We will work with Dr. Wang at the Ohio State University to understand the role of histone methylations in prostate cancer.
 
. 07/2011:  Liguo's FoxA1 cistrome paper was accepted to '''Cancer Research'''.
 
. 07/2011: See our '''[http://www.genomeweb.com/node/973004 Genomic Regulation Technical Guide]''' on Genome Technology magazine
 
. 07/2011: Dr. Zheng Xia will join us as a postdoc fellow. Zheng has PhD in Control Theory and Engineering Computer Science from Zhejiang University in China. Welcome!
 
. 05/2011:  Dr.Bert O'Malley's coregulator network paper was published in '''Cell'''. Wei is a co-author on the paper.
 
. 04/2011:  Liguo's Prostate Cancer RNA-seq paper was officially accepted to  '''PNAS'''.
 
. 03/2011:  Our Texas '''CPRIT Multi-Investigator grant''' was funded with a total direct cost of  ~$10M for 5 years. This project will bring together a "dream team" in cancer epigenetic research.  We will direct the bioinformatics component for LONESTAR.
 
. 01/2011:  Yuanxin's fragile nucleosome paper was accepted to  '''Genome Research'''.
 
. 01/2011:  Yuanxin and Liguo's  Atoh1 targetome paper was accepted to  '''PNAS'''.
 
. 12/2010: Liguo's fly RNA-seq paper was published in Genome Research.
 
. 10/2010: A Texas CPRIT grant was funded. We will work with Dr. Goodell at BCM to understand DNA Methylgransferase 3B in normal and malignant hematopoiesis.
 
. 08/2010: Our Pilot Project was funded by a NIH Stem Cell P01 Grant.
 
. 07/2010: The DNA methylation platform comparision paper was accepted to Nature Biotechnology.
 
. 06/2010: Hao Zhao will join us as a '''postdoc fellow'''. Hao has a PhD in Computer Science from City University of Hong Kong.  Welcome!
 
. 05/2010:  Our paper titled "Histone modifications and chromatin organization in prostate cancer" has been accepted by '''Epigenomics'''.
 
. 01/2010:  A Texas '''CPRIT grant''' has been funded. We will use ChIP-seq and RNA-seq to analyze Androgen Receptor (AR) function in Prostate Cancer with Dr. Weigel at BCM.
 
. 01/2010:  Wei Li is an invited speaker in the American Association for Cancer Research (AACR) Special '''Conference on Cancer Epigenetics''' at Puerto Rico.
 
. 01/2010: Deqiang Sun will join us as a postdoc fellow. Deqiang has a PhD in Condensed Matter Physics from Texas A&M University.  Welcome!
 
. 12/2009:  Dr.Bert O'Malley's SRC-3 ChIP-seq paper has been accepted by '''Molecular Endocrinology'''. Liguo and Wei are co-authors on the paper.
 
. 12/2009:  Liguo's RNA-seq methodology paper has been accepted by '''PLoS ONE'''. Congratulations Liguo!
 
. 11/2009:  Wei Li received a '''New Investigator Award''' from the Department of Defense (DOD) Prostate Cancer Research Program (PCRP). Cheers!
 
. 11/2009:  Wei Li gave a '''Keynote Presentation''' at the Symposium on Advances in Cell Signaling, Cancer Prevention and Therapy at South Padre Island, Texas.
 
. 09/2009:  A prestigious '''NIH Challenge grant''' has been funded. We will use ChIP-seq to analyze RXRa binding in mouse liver with Dr. Karpen at Texas Children's Hospital.
 
. 09/2009:  A two-year $2.5 million '''NIH Grand Opportunity (GO) grant''' has been funded. We will study aging epigenomics with Drs. Darlington and Goodell at BCM.
 
. 09/2009:  A prestigious '''NIH Challenge grant''' has been funded. We will use RNA-seq to characterize patient cardiac progenitors with Dr. Pu at Harvard Medical School.
 
. 06/2009:  Yuanxin's Bisulfite Sequence Mapping paper has been accepted by '''BMC Bioinformatics'''. Congratulations Yuanxin!
 
. 06/2009: Kaifu Chen has accepted our postdoc offer. Kaifu has a PhD in Genomics and Bioinformatics from Beijing Institute of Genomics, Chinese Academy of Sciences.  Welcome!
 
. 03/2009:  Wei's paper titled 'Reprogrammed Androgen Receptor Function in Androgen-Independent Prostate Cancer' has been accepted by '''Cell'''.
 
. 03/2009: '''[http://cancerepigenome.pbwiki.com/ Cancer Epigenomics Workshop]''' Please join us on May 2nd 2009 at MD Anderson Cancer Center. This meeting is organized by Steffi Oesterreich, Wei Li and Jean-Pierre Issa.

Revision as of 07:20, 13 July 2015

Home        People        Publications        Collaborations        Software        Positions        Contact       


. 12/2013: Kaifu's aging nucleosome paper is accepted to Genes & Development

. 12/2013: We received a 5-year NIH/NHGRI R01 grant (scored at 6 percentile in its first submission) to study DNA Methylation

. 11/2013: Wei will serve on the Editorial Board of Molecular Endocrinology

. 09/2013: Deqiang's DNA methylation Canyon paper is accepted to Nature Genetics.

. 09/2013: Xueqiu's bisulfite sequencing quality control paper (BSeQC) is accepted to Bioinformatics.

. 08/2013: Kadir's p53 paper is accepted to Nucleic Acids Research

. 01/2013: BCM News and Epigenie Headline about our recent work on nucleosome dynamics.

. 12/2012: Liguo and HJ's CPAT RNA coding potential prediction paper is accepted to Nucleic Acids Research.

. 11/2012: Kaifu's nucleosome methodology paper DANPOS is accepted to Genome Research.

. 10/2012: Kaifu's promoter nucleosome paper is accepted to Genome Research.

. 09/2012: A NIH R01 grant was funded. We will work with Dr. Issa at Temple Univ. to understand DNA methylation in Cancer.

. 08/2012: A mouse ES nucleosome paper from Kaestner lab at Upenn is accepted to Cell. Kaifu and Wei used DANPOS to analyze the data and were listed as co-authors.

. 08/2012: Dr. Benjamin Rodriguez will join us as a Postdoc Associate. Ben has PhD in Integrated Biomedical Science from the Ohio State Univ. Welcome!

. 08/2012: A Mazzone Award is funded. We will work with Dr. Balk at Harvard Medical School to understand the molecular features of aggressive prostate cancer.

. 06/2012: Liguo's RNA-seq Quality Control paper is accepted to Bioinformatics.

. 06/2012: A NIH R01 grant is funded. We will work with Dr. Goodell at BCM to understand DNA methylation in Hematopoietic Stem Cell.

. 04/2012: A NIH R01 grant is funded. We will work with Dr. Dent at MD Anderson to define USP22 functions during mammalian development.

. 04/2012: Dr.Dean Tang's prostate cancer stem cell paper is accepted in Cell Stem Cell. Wei is a co-author.

. 02/2012: Yuanxin's epigenetic paper with Katrin Chua lab at Stanford is accepted to Nature. Two years of hard work finally paid off!

. 02/2012: Liguo Wang is offered a tenure-track Assistant Professor position at Mayo Clinic. Congratulations!

. 02/2012: Justin Park will join us as a Postdoc Associate. Justin will graduate in May with a PhD in Computer Science from Rice University. Welcome!

. 11/2011: Yuanxin's RRBSMAP paper was accepted to Bioinformatics.

. 09/2011: Wei Li was promoted to tenured Associate Professor at BCM. Cheers!

. 09/2011: Deqiang's DNA methylation paper with Peggy Goodell lab was accepted to Nature Genetics.

. 08/2011: Kaifu's NSD2 epigenetic paper with Or Gozani lab at Stanford was accepted to Molecular Cell.

. 08/2011: A NIH R01 grant was funded. We will work with Dr. Wang at the Ohio State University to understand the role of histone methylations in prostate cancer.

. 07/2011: Liguo's FoxA1 cistrome paper was accepted to Cancer Research.

. 07/2011: See our Genomic Regulation Technical Guide on Genome Technology magazine

. 07/2011: Dr. Zheng Xia will join us as a postdoc fellow. Zheng has PhD in Control Theory and Engineering Computer Science from Zhejiang University in China. Welcome!

. 05/2011: Dr.Bert O'Malley's coregulator network paper was published in Cell. Wei is a co-author on the paper.

. 04/2011: Liguo's Prostate Cancer RNA-seq paper was officially accepted to PNAS.

. 03/2011: Our Texas CPRIT Multi-Investigator grant was funded with a total direct cost of ~$10M for 5 years. This project will bring together a "dream team" in cancer epigenetic research. We will direct the bioinformatics component for LONESTAR.

. 01/2011: Yuanxin's fragile nucleosome paper was accepted to Genome Research.

. 01/2011: Yuanxin and Liguo's Atoh1 targetome paper was accepted to PNAS.

. 12/2010: Liguo's fly RNA-seq paper was published in Genome Research.

. 10/2010: A Texas CPRIT grant was funded. We will work with Dr. Goodell at BCM to understand DNA Methylgransferase 3B in normal and malignant hematopoiesis.

. 08/2010: Our Pilot Project was funded by a NIH Stem Cell P01 Grant.

. 07/2010: The DNA methylation platform comparision paper was accepted to Nature Biotechnology.

. 06/2010: Hao Zhao will join us as a postdoc fellow. Hao has a PhD in Computer Science from City University of Hong Kong. Welcome!

. 05/2010: Our paper titled "Histone modifications and chromatin organization in prostate cancer" has been accepted by Epigenomics.

. 01/2010: A Texas CPRIT grant has been funded. We will use ChIP-seq and RNA-seq to analyze Androgen Receptor (AR) function in Prostate Cancer with Dr. Weigel at BCM.

. 01/2010: Wei Li is an invited speaker in the American Association for Cancer Research (AACR) Special Conference on Cancer Epigenetics at Puerto Rico.

. 01/2010: Deqiang Sun will join us as a postdoc fellow. Deqiang has a PhD in Condensed Matter Physics from Texas A&M University. Welcome!

. 12/2009: Dr.Bert O'Malley's SRC-3 ChIP-seq paper has been accepted by Molecular Endocrinology. Liguo and Wei are co-authors on the paper.

. 12/2009: Liguo's RNA-seq methodology paper has been accepted by PLoS ONE. Congratulations Liguo!

. 11/2009: Wei Li received a New Investigator Award from the Department of Defense (DOD) Prostate Cancer Research Program (PCRP). Cheers!

. 11/2009: Wei Li gave a Keynote Presentation at the Symposium on Advances in Cell Signaling, Cancer Prevention and Therapy at South Padre Island, Texas.

. 09/2009: A prestigious NIH Challenge grant has been funded. We will use ChIP-seq to analyze RXRa binding in mouse liver with Dr. Karpen at Texas Children's Hospital.

. 09/2009: A two-year $2.5 million NIH Grand Opportunity (GO) grant has been funded. We will study aging epigenomics with Drs. Darlington and Goodell at BCM.

. 09/2009: A prestigious NIH Challenge grant has been funded. We will use RNA-seq to characterize patient cardiac progenitors with Dr. Pu at Harvard Medical School.

. 06/2009: Yuanxin's Bisulfite Sequence Mapping paper has been accepted by BMC Bioinformatics. Congratulations Yuanxin!

. 06/2009: Kaifu Chen has accepted our postdoc offer. Kaifu has a PhD in Genomics and Bioinformatics from Beijing Institute of Genomics, Chinese Academy of Sciences. Welcome!

. 03/2009: Wei's paper titled 'Reprogrammed Androgen Receptor Function in Androgen-Independent Prostate Cancer' has been accepted by Cell.

. 03/2009: Cancer Epigenomics Workshop Please join us on May 2nd 2009 at MD Anderson Cancer Center. This meeting is organized by Steffi Oesterreich, Wei Li and Jean-Pierre Issa.

Retrieved from "https://openwetware.org/mediawiki/index.php?title=Li_Lab:news&oldid=892966"