| Date
|
Presenter
|
Paper
|
Snack Provider
|
| 2014/12/19 |
Sascha |
Anaerobic methane oxidation coupled to denitrification is the dominant methane sink in a deep lake PNAS (2014) |
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|
| 2014/12/04 |
Mila |
Nyak DD & Marx CJ. Methylamine Utilization via the N-Methylglutamate Pathway in Methylobacterium extorquens PA1 Involves a Novel Flow of Carbon through C1 Assimilation and Dissimilation Pathways. J Bacteriol (2014). |
Mila
|
| 2014/11/14 |
Amanda |
Bogorad et al. Building carbon-carbon bonds using a biocatalytic methanol condensation cycle. |
Frances
|
| 2014/11/07 |
Frances |
Wang BL et al. Microfluidic high-throughput culturing of single cells for selection based on extracellular metabolite production or consumption. Nat Biotechnol (2014). |
Sascha
|
| 2014/10/31 |
Aaron |
Ye RW et al. Construction of the astaxanthin biosynthetic pathway in a methanotrophic bacterium Methylomonas sp. strain 16a. J Ind Microbiol Biotechnol (2007). |
Amanda
|
| 2014/10/03 |
Melissa |
Lin MT et al. A faster Rubisco with potential to increase photosynthesis in crops. Nature (2014). |
Janet
|
| 2014/09/26 |
Alexey |
Tips and tricks for being a good lab human |
Mila
|
| 2014/08/08 |
Amanda |
Noor E et al. Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism PLoS Comput Biol (2014). |
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|
| 2014/08/01 |
Aaron |
Rozova ON et al. Characterization of recombinant pyrophosphate-dependent 6-phosphofructokinase from halotolerant methanotroph Methylomicrobium alcaliphilum 20Z. Res Microbiol (2010). |
Janet
|
| 2014/07/18 |
Alexey |
Ramezani M et al. Improved Modeling of Bubble Column Reactors by Considering the Bubble Size Distribution. I&EC Research (2012) |
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|
| 2014/07/11 |
Frances |
Chen KH et al. Bacteriohemerythrin bolsters the activity of the pMMO in Methylococcus capsulatus (Bath). J Inorg Biochem (2012). |
Amanda
|
| 2014/06/27 |
Amanda, Janet, & Aaron |
Metabolic Engineering X Conference Recap |
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|
| 2014/06/13 |
Bo |
Paddon CJ et al. High-level semi-synthetic production of the potent antimalarial artemisinin. Nature (2013). |
Maria
|
| 2014/05/30 |
Mila |
Kemp MB & Quayle JR. Microbial growth on C1 compounds. Incorporation of C1 units into allulose phosphate by extracts of Pseudomonas methanica. Biochem J (1966). |
Mila
|
| 2014/05/23 |
Aaron |
Crombie AT & Murrell JC. Trace-gas metabolic versatility of the facultative methanotroph Methylocella silvestris. Nature (2014). |
Mila
|
| 2014/05/16 |
Maria |
Chauhan A et al. Composition of methane-oxidizing bacterial communities as a function of nutrient loading in the Florida everglades. Microb Ecol (2012). |
Mila
|
| 2014/05/09 |
Amanda |
Chou H & Keasling JD. Programming adaptive control to evolve increased metabolite production. Nat Comm (2013). |
Janet
|
| 2014/05/02 |
Sascha |
Andrade-Domínguez A et al. Eco-evolutionary feedbacks drive species interactions. ISME J (2014). |
Mila
|
| 2014/04/25 |
Bo |
Lan EL & Liao JC. ATP drives direct photosynthetic production of 1-butanol in cyanobacteria. Proc Natl Acad Sci (2012). |
Mila
|
| 2014/04/18 |
Frances |
Dunfield PF et al. Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia. Nature (2007). |
Bo
|
| 2014/04/11 |
Amanda |
Dahl RH et al. Engineering dynamic pathway regulation using stress-response promoters. Nat Biotechnol (2013). |
Frances
|
| 2014/03/21 |
Maria |
Wieczorek AS et al. Organic acids and ethanol inhibit the oxidation of methane by mire methanotrophs. FEMS Microbiol Ecol (2011). |
Aaron
|
| 2014/03/14 |
Sascha |
Dam B et al. Ammonium induces differential expression of methane and nitrogen metabolism-related genes in Methylocystis sp. strain SC2. Environ Microbiol (2013). |
Amanda
|
| 2014/02/28 |
Aaron |
Bogorad IW et al. Synthetic non-oxidative glycolysis enables complete carbon conservation. Nature (2013). |
Maria
|
| 2014/02/21 |
Janet |
Jiang W et al. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat Biotechnol (2013). |
Igor
|
| 2014/02/14 |
Dave |
Gomaa AA et al. Programmable Removal of Bacterial Strains by Use of Genome-Targeting CRISPR-Cas Systems. mBio (2014). |
Sascha
|
| 2014/02/07 |
Bo |
Na D et al. Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs. Nat Biotechnol (2013). |
Janet
|
| 2014/01/31 |
Alexey |
Dellomonaco C et al. Engineered reversal of the b-oxidation cycle for the synthesis of fuels and chemicals. Nature (2011). |
Amanda
|
| 2014/01/24 |
Amanda |
Kudla G et al. Coding-Sequence Determinants of Gene Expression in Escherichia coli. Science (2009). |
Frances
|
| 2014/01/17 |
Frances |
Goodman AL et al. Identifying Genetic Determinants Needed to Establish a Human Gut Symbiont in Its Habitat. Cell Host Microbe (2009). |
Aaron
|
| 2014/01/10 |
Aaron |
Tamas I et al. The (d)evolution of methanotrophy in the Beijerinckiaceae—a comparative genomics analysis. ISME J (2013). |
Mila
|
| 2013
|
| 2013/12/06 |
Alexey |
Wen M et al. Production of advanced biofuels in engineered E. Coli. Curr Opin Chem Biol (2013). |
Amanda
|
| 2013/11/22 |
Mila |
Kalyuzhnaya MG et al. Highly efficient methane biocatalysis revealed in a methanotrophic bacterium. Nat Commun (2013). |
Mila
|
| 2013/11/15 |
Dave |
Lee SJ et al. Control of substrate access to the active site in methane monooxygenase. Nature (2013). |
Aaron
|
| 2013/11/08 |
Amanda |
Blount ZD et al. Genomic analysis of a key innovation in an experimental Escherichia coli population. Nature (2012). |
Yanfen
|
| 2013/11/01 |
Frances |
Semrau JD et al. Methanobactin and MmoD work in concert to act as the 'copper-switch' in methanotrophs. Environmental Microbiology (2013). |
Janet
|
| 2013/10/25 |
Bo |
Dietrich JA et al. Transcription factor-based screens and synthetic selections for microbial small-molecule biosynthesis. ACS Synth Biol (2013). |
Frances
|
| 2013/10/18 |
Aaron |
Iguchi H et al. Stimulation of methanotrophic growth in cocultures by cobalamin excreted by rhizobia. Appl Environ Microbiol (2011). |
Amanda
|
| 2013/10/11 |
Mila |
Stock M et al. Exploration and prediction of interactions between methanotrophs and heterotrophs. Res Microbiol (2013). |
Mila
|
| 2013/10/04 |
Alexey |
Ro DK et al. Production of the antimalarial drug precursor artemisinic acid in engineered yeast. Nature (2006). |
Igor
|
| 2013/09/20 |
Amanda |
Barrick JE et al. Genome evolution and adaptation in a long-term experiment with Escherichia coli. Nature (2009). |
Janet
|
| 2013/09/13 |
Frances |
Nakagawa T et al. A catalytic role of XoxF1 as La3+-dependent methanol dehydrogenase in Methylobacterium extorquens strain AM1. PLoS One (2012). |
Bo
|
| 2013/09/06 |
Igor |
Dekas AE et al. Deep-sea archaea fix and share nitrogen in methane-consuming microbial consortia. Science (2009). |
Frances
|
| 2013/08/30 |
Mila |
Haroon MF et al. Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage. Nature (2013). |
Mila
|
| 2013/08/23 |
Amanda |
Blount ZD et al. Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli. Proc Natl Acad Sci (2008). |
Dave
|
| 2013/08/16 |
Yanfen |
Schuetz R et al. Multidimensional optimality of microbial metabolism. Science (2012). |
Mila
|
| 2013/08/09 |
Nate |
Okubo Y et al. Alternative route for glyoxylate consumption during growth on two-carbon compounds by Methylobacterium extorquens AM1. J Bacteriol (2010). |
Janet
|
| 2013/08/02 |
Aaron |
Ettwig KF et al. Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature (2010). |
Amanda
|
| 2013/07/26 |
Alexey |
Ajikumar PK et al. Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli. Science (2010). |
Aaron
|
| 2013/07/19 |
Bo |
Erb TJ et al. Synthesis of C5-dicarboxylic acids from C2-units involving crotonyl-CoA carboxylase/reductase: the ethylmalonyl-CoA pathway. Proc Natl Acad Sci (2007). |
:(
|
| 2013/07/12 |
Frances |
Balasubramanian R et al. Oxidation of methane by a biological dicopper centre. Nature (2010). |
Amanda
|
| 2013/06/28 |
Aaron |
Chistoserdova L et al. C1 transfer enzymes and coenzymes linking methylotrophic bacteria and methanogenic Archaea. Science (1998). |
Frances
|
