LncRNA ToDoList: Difference between revisions
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==February | ==February 23, 2012== | ||
Joe | |||
set up a database and a wiki | |||
lncrna analysis with reduced cutoff at 0.5 from 1 | |||
transcription factor & the dip of the histone modification | |||
==February 8,2012== | |||
h2az | |||
divide genes into different categories such as lncrnas , mirrnas , and some specific processes/pathways, | |||
Revision as of 10:29, 23 February 2012
February 23, 2012
Joe
set up a database and a wiki
lncrna analysis with reduced cutoff at 0.5 from 1
transcription factor & the dip of the histone modification
February 8,2012
h2az
divide genes into different categories such as lncrnas , mirrnas , and some specific processes/pathways,
February 3, 2012
LncRNAs, their temproal nd spatial function in the regulation of expression.
1. There is a gap between day 3 and day 6, may add day 4 and 5 rna-seq data
2. There possibly a transition during day 1 and day 3 that lunch renascence and mirrnas are associated in early stage of differentiation
3. The network makes sense to the stage specific differentiation. However, add some mirrnasback to the network ?
4. Mesp4 is picked for downstreame study because mesp4 seems to be a master regulator in early stage at the starting point. There is a linear regulation leading to the carjacking differentiation.
5.does mesp1 overexpfession rescue the phenotype?
6. Does mesp1 knock outhave the samephenotype?
7. How lncrna affects expression?